Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FGL00_RS08990 Genome accession   NZ_LR594034
Coordinates   1794054..1794779 (-) Length   241 a.a.
NCBI ID   WP_003057032.1    Uniprot ID   A0A9X5LWD8
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1789054..1799779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL00_RS08960 (NCTC8546_01855) nusA 1789248..1790405 (-) 1158 WP_138098716.1 transcription termination factor NusA -
  FGL00_RS08965 (NCTC8546_01856) rimP 1790548..1791042 (-) 495 WP_044022604.1 ribosome maturation factor RimP -
  FGL00_RS08975 (NCTC8546_01858) trmB 1791526..1792161 (-) 636 WP_003052470.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FGL00_RS08980 (NCTC8546_01859) - 1792161..1792952 (-) 792 WP_138098718.1 phosphotransferase family protein -
  FGL00_RS08985 (NCTC8546_01860) - 1793017..1794051 (-) 1035 WP_138084013.1 ABC transporter permease -
  FGL00_RS08990 (NCTC8546_01861) pptA 1794054..1794779 (-) 726 WP_003057032.1 ABC transporter ATP-binding protein Regulator
  FGL00_RS08995 (NCTC8546_01862) - 1794851..1795270 (+) 420 WP_012767493.1 HIT family protein -
  FGL00_RS09000 (NCTC8546_01863) - 1795267..1795596 (+) 330 WP_003057072.1 hypothetical protein -
  FGL00_RS09005 (NCTC8546_01864) - 1795754..1797022 (-) 1269 WP_041789135.1 LCP family protein -
  FGL00_RS09010 (NCTC8546_01865) - 1797034..1797555 (-) 522 WP_046176854.1 GNAT family N-acetyltransferase -
  FGL00_RS09015 (NCTC8546_01866) tsaE 1797548..1797991 (-) 444 WP_014612541.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FGL00_RS09020 (NCTC8546_01867) - 1798168..1799628 (-) 1461 WP_012767496.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26416.65 Da        Isoelectric Point: 4.6450

>NTDB_id=1127258 FGL00_RS08990 WP_003057032.1 1794054..1794779(-) (pptA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYQGEISIDGLTLTADPAAYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAEPFLKMFRLADKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLELEKGKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLADLQDAFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1127258 FGL00_RS08990 WP_003057032.1 1794054..1794779(-) (pptA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
ATGTTAAACATTGAAAATCTAACGGGGGGTTACCTCAATATTCCCGTTTTAAAAGAGGTCTCATTTTCTGTTGGCAATGG
TGAATTAGTTGGGTTGATAGGCTTAAATGGAGCTGGAAAATCAACAACTATCAATGAAATTATTGGTTTTTTAAAACCTT
ATCAGGGAGAAATCTCGATTGATGGACTAACCTTGACTGCAGATCCAGCTGCCTATCGTAAGAAAATTGGATTTATCCCA
GAGACACCTAGCCTCTATGAAGAATTAACTTTGGCAGAGCATATTAATACTGTGGCTATGGCCTATGATATTGATGTGGA
ATTGGCACAAAAACGAGCAGAACCGTTTTTAAAGATGTTCCGCTTAGCTGATAAATTAGATTGGTTTCCTGTTCATTTTT
CAAAAGGCATGAAGCAAAAAGTCATGATTATCTGTGCTTTTGTGATTGATCCAAGTCTGTTTATCCTTGACGAGCCATTT
TTAGGATTAGACCCGTTGGCTATCTCAGACTTGATTCAGACTTTGGAGCTTGAAAAAGGCAAAGGCAAATCGATTTTAAT
GAGTACTCATGTGCTTGACTCTGCTGAGAAAATGTGTGATCGTTTTGTCATTCTGCATCATGGTCAAGTACGGGCTCAGG
GAACGCTTGCTGACTTGCAGGATGCCTTTGGTGATGCTTCTGCTAGCCTTAACGATATTTACCTGGCATTGACAAAAGAG
GGCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

99.17

0.747
  pptA Streptococcus thermophilus LMD-9

74.477

99.17

0.739

Multiple sequence alignment