Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   FGL00_RS08055 Genome accession   NZ_LR594034
Coordinates   1597728..1598765 (-) Length   345 a.a.
NCBI ID   WP_015017242.1    Uniprot ID   A0A9X8T209
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1592728..1603765
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL00_RS08030 (NCTC8546_01669) - 1594013..1594791 (-) 779 Protein_1530 substrate-binding domain-containing protein -
  FGL00_RS08035 (NCTC8546_01670) - 1594791..1595171 (-) 381 Protein_1531 ATP-binding cassette domain-containing protein -
  FGL00_RS08040 (NCTC8546_01671) rbsD 1595187..1595585 (-) 399 WP_003051896.1 D-ribose pyranase -
  FGL00_RS08045 (NCTC8546_01672) rbsK 1595560..1596471 (-) 912 WP_003061715.1 ribokinase -
  FGL00_RS08050 (NCTC8546_01673) - 1596464..1597447 (-) 984 WP_003053684.1 LacI family DNA-binding transcriptional regulator -
  FGL00_RS08055 (NCTC8546_01674) sepM 1597728..1598765 (-) 1038 WP_015017242.1 SepM family pheromone-processing serine protease Regulator
  FGL00_RS08060 (NCTC8546_01675) coaD 1598752..1599243 (-) 492 WP_065957290.1 pantetheine-phosphate adenylyltransferase -
  FGL00_RS08065 (NCTC8546_01676) rsmD 1599233..1599772 (-) 540 WP_014612463.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  FGL00_RS08070 (NCTC8546_01677) asnA 1600007..1600999 (-) 993 WP_003061055.1 aspartate--ammonia ligase -
  FGL00_RS08075 (NCTC8546_01678) arcC 1601326..1602276 (-) 951 WP_012767309.1 carbamate kinase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37603.18 Da        Isoelectric Point: 9.4270

>NTDB_id=1127253 FGL00_RS08055 WP_015017242.1 1597728..1598765(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
MKTIKKIKWWLISLIALVALLIVLFFPLPYYVEMPGGAYDIRSVVKVNGKEDKDKGSYQFVAVSLSRASLAQLLYAWLTP
FTEISSVEDTTGGYSDADYIRINQFYMETSQNAAVYQALTLADKPVTLDYKGVYVLDISKDSTFKGTLNLADTVTGVNHK
QFTSSTELVDYVSHLKLGDKVTVQFISNSEPKSETGRIIKLKNGKNGIGIALTDHTKVNSAEKIEFSTQGVGGPSAGLMF
TLDIYDQINKEDLRKGRHIAGTGTIGKDGEVGDIGGAGLKVVAAADAGAEIFFVPNNPVDKAVKKANPKAISNYEEAKRA
AKQLKTKMKIVPVTTVQDALAYLRQ

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1127253 FGL00_RS08055 WP_015017242.1 1597728..1598765(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
ATGAAAACAATTAAAAAAATTAAATGGTGGCTGATTAGCCTAATTGCCCTCGTGGCTCTGCTTATCGTCCTTTTTTTCCC
TCTTCCTTATTATGTTGAAATGCCTGGCGGAGCCTATGACATTCGATCTGTGGTCAAGGTTAATGGCAAAGAAGATAAAG
ATAAAGGCTCCTATCAGTTTGTGGCAGTCAGTCTCAGTCGAGCCAGTTTAGCTCAGTTGCTCTATGCTTGGCTAACCCCT
TTTACTGAAATCAGTTCAGTTGAGGATACCACAGGCGGTTATAGCGATGCAGACTATATCCGCATTAATCAATTCTACAT
GGAAACCTCACAAAATGCTGCGGTCTATCAGGCATTGACCTTGGCAGACAAACCAGTTACTTTGGACTACAAAGGGGTAT
ATGTGTTAGATATTAGCAAGGATTCAACCTTTAAAGGTACTTTAAACTTAGCAGATACGGTAACGGGAGTGAATCACAAA
CAATTTACGAGTTCAACAGAACTTGTGGACTATGTCTCTCATTTAAAACTTGGTGATAAGGTGACTGTGCAGTTTATTAG
TAATAGCGAACCTAAGTCTGAAACAGGTCGTATCATCAAACTAAAAAATGGTAAAAATGGTATCGGCATTGCTTTAACAG
ACCATACTAAAGTCAATTCAGCAGAGAAAATCGAGTTTAGTACCCAAGGTGTTGGGGGTCCTAGCGCAGGCTTAATGTTT
ACATTAGATATCTACGACCAAATTAATAAAGAAGACCTTCGTAAAGGAAGACATATCGCCGGGACAGGAACCATTGGTAA
AGATGGTGAAGTTGGAGATATTGGCGGTGCGGGTCTTAAGGTCGTTGCTGCTGCAGATGCTGGTGCTGAGATTTTCTTTG
TGCCGAATAATCCTGTGGATAAAGCTGTTAAAAAAGCCAATCCAAAAGCTATTAGCAATTATGAAGAGGCCAAGCGAGCA
GCCAAGCAGTTAAAAACAAAAATGAAAATTGTTCCTGTAACAACTGTTCAGGATGCCCTAGCCTACCTTCGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

71.594

100

0.716


Multiple sequence alignment