Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   FGK99_RS02755 Genome accession   NZ_LR594033
Coordinates   576556..577593 (+) Length   345 a.a.
NCBI ID   WP_138118935.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC4675     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 571556..582593
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK99_RS02730 (NCTC4675_00558) - 571868..573199 (+) 1332 WP_043025442.1 dipeptidase -
  FGK99_RS02735 (NCTC4675_00559) arcC 573217..574167 (+) 951 WP_138118930.1 carbamate kinase -
  FGK99_RS02740 (NCTC4675_00560) asnA 574387..575379 (+) 993 WP_012515219.1 aspartate--ammonia ligase -
  FGK99_RS02745 (NCTC4675_00561) rsmD 575549..576088 (+) 540 WP_012515220.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  FGK99_RS02750 (NCTC4675_00562) coaD 576078..576578 (+) 501 WP_138118933.1 pantetheine-phosphate adenylyltransferase -
  FGK99_RS02755 (NCTC4675_00563) sepM 576556..577593 (+) 1038 WP_138118935.1 SepM family pheromone-processing serine protease Regulator
  FGK99_RS02760 (NCTC4675_00564) - 578194..578808 (+) 615 WP_043040267.1 YutD family protein -
  FGK99_RS02765 (NCTC4675_00565) rlmN 578812..579894 (+) 1083 WP_043029472.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  FGK99_RS02770 (NCTC4675_00566) - 580321..580770 (-) 450 WP_231147405.1 peptidase -
  FGK99_RS02775 (NCTC4675_00567) - 581169..581699 (+) 531 WP_014622497.1 Dps family protein -
  FGK99_RS02780 (NCTC4675_00568) - 582072..582305 (+) 234 WP_012515231.1 YqgQ family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37449.11 Da        Isoelectric Point: 9.5289

>NTDB_id=1127170 FGK99_RS02755 WP_138118935.1 576556..577593(+) (sepM) [Streptococcus equi subsp. zooepidemicus strain NCTC4675]
MKTIKKFKWWLIGFVALLFLLLTLFFPLPYYIEMPGGAYDIRSVLTVNGKKDKEKGAYQFVVVSLSRATLAKLLYAWLTP
FTEISTMEDTTGGYSDADYLRINRFYMETSQNSAVYQALTLAGKEVSFDYKGVYVLDVSKDSSFKGVLHLADTVTGVNGK
TFTTSADLIDYVSHLTLGDEVQVQFTTAGESKTEKGKIIKLKNGKNGIGITLTDHTQVISGDEVDFSTGGVGGPSAGLMF
TLDIYDQINHEDLRKGRVIAGTGTIGKDGKVGDIGGAGLKVAAAAAAGADIFFVPNNPVDKDVKKANPKAISNYEEAKKA
AKRLKTAMKIIPVKTVQDAISYLKK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1127170 FGK99_RS02755 WP_138118935.1 576556..577593(+) (sepM) [Streptococcus equi subsp. zooepidemicus strain NCTC4675]
ATGAAAACAATAAAAAAATTTAAATGGTGGCTGATCGGCTTTGTTGCCTTGCTTTTTCTACTGTTGACACTGTTTTTCCC
CTTGCCTTATTATATTGAAATGCCAGGTGGAGCCTATGATATTCGCTCGGTATTGACTGTCAATGGCAAAAAGGATAAGG
AAAAGGGGGCTTATCAGTTTGTTGTAGTGAGTCTAAGTCGGGCCACCTTGGCTAAATTGCTCTATGCTTGGCTAACCCCT
TTCACTGAGATTAGCACCATGGAAGATACTACTGGTGGCTATAGCGATGCTGATTACCTGCGAATTAATCGCTTTTATAT
GGAAACCTCTCAAAACAGCGCTGTTTATCAGGCTCTTACTCTAGCAGGTAAGGAGGTAAGCTTTGATTATAAGGGTGTTT
ATGTCTTAGACGTCAGCAAGGACTCTAGCTTTAAAGGTGTGCTGCACCTAGCAGATACAGTGACAGGTGTCAATGGTAAA
ACATTTACAACGTCTGCCGATCTGATTGATTATGTCTCTCATTTGACCTTGGGAGATGAGGTGCAGGTACAATTTACAAC
CGCTGGTGAGTCAAAGACTGAAAAAGGAAAGATTATTAAGCTTAAAAACGGTAAAAATGGGATTGGCATTACCCTGACAG
ACCACACACAGGTCATTTCTGGTGATGAGGTCGACTTTAGCACCGGAGGTGTGGGTGGACCAAGTGCAGGCTTGATGTTT
ACTCTTGATATTTATGATCAAATCAATCACGAAGACTTGCGCAAGGGACGTGTGATTGCTGGTACAGGAACCATTGGCAA
GGATGGAAAAGTTGGAGATATTGGCGGGGCGGGCCTAAAGGTGGCTGCCGCCGCCGCTGCTGGTGCTGATATTTTCTTTG
TTCCAAATAATCCTGTGGATAAGGACGTCAAAAAAGCAAATCCTAAGGCTATTAGCAATTACGAGGAGGCTAAAAAAGCA
GCTAAACGACTAAAGACAGCAATGAAAATTATTCCTGTGAAAACCGTTCAAGATGCTATAAGCTACCTTAAAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.855

100

0.699


Multiple sequence alignment