Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   FGK95_RS10500 Genome accession   NZ_LR590625
Coordinates   2105613..2106380 (+) Length   255 a.a.
NCBI ID   WP_093999373.1    Uniprot ID   -
Organism   Streptococcus canis strain B700072     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2100613..2111380
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK95_RS10470 (SAMEA5186854_02105) yaaA 2100842..2101255 (-) 414 WP_093999511.1 S4 domain-containing protein YaaA -
  FGK95_RS10475 - 2101335..2102234 (-) 900 Protein_1986 IS30 family transposase -
  FGK95_RS10480 - 2102457..2103281 (-) 825 Protein_1987 DDE-type integrase/transposase/recombinase -
  FGK95_RS10490 (SAMEA5186854_02111) rlmH 2103601..2104080 (-) 480 WP_093999375.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FGK95_RS10495 (SAMEA5186854_02112) htrA 2104293..2105516 (+) 1224 WP_093999374.1 S1C family serine protease Regulator
  FGK95_RS10500 (SAMEA5186854_02113) spo0J 2105613..2106380 (+) 768 WP_093999373.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 28708.41 Da        Isoelectric Point: 10.0683

>NTDB_id=1127133 FGK95_RS10500 WP_093999373.1 2105613..2106380(+) (spo0J) [Streptococcus canis strain B700072]
MTELLIQIPIEDIVANPYQPRLQFNQKELEDLARSIKANGLIQPIIVRKSDIFGYELVAGERRFKASKIAGLTKVPAIVK
TISALESMQQAIVENLQRADLNAIEEAKAYQLLIDKNKMTHEEVAKYMGKSRPYISNTLRLLQLPDSIQRAVENGDISAG
HARALLAFSNEKEQLLYATKIKNEGMSVRQIEQLVTPKPKKSKKDKDIFVTSLEKQLAKSLGLKATIKLTSHQTGHLQLP
FANEDELNRIINKLL

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1127133 FGK95_RS10500 WP_093999373.1 2105613..2106380(+) (spo0J) [Streptococcus canis strain B700072]
ATGACAGAATTATTGATACAAATTCCCATTGAAGATATTGTGGCAAATCCCTATCAGCCAAGACTTCAATTTAATCAAAA
AGAGCTTGAAGACTTAGCAAGGTCAATCAAAGCAAATGGACTTATTCAACCTATTATCGTTCGAAAATCTGATATTTTTG
GTTATGAACTAGTCGCTGGAGAACGACGATTTAAAGCTTCAAAAATAGCAGGACTAACCAAAGTACCAGCTATTGTCAAA
ACAATATCAGCACTTGAAAGCATGCAACAAGCCATTGTTGAAAATTTACAACGAGCTGACCTAAATGCCATCGAAGAAGC
CAAAGCCTACCAGTTACTTATTGACAAAAATAAGATGACTCATGAAGAGGTTGCCAAATATATGGGGAAATCCAGACCCT
ATATTAGCAATACCTTGCGCTTGTTACAACTACCAGATTCTATCCAGAGAGCCGTAGAAAATGGGGACATTAGTGCTGGT
CACGCGCGAGCCTTATTGGCTTTTTCTAATGAAAAAGAACAATTACTATATGCCACTAAAATCAAAAATGAAGGCATGAG
TGTTCGACAAATTGAACAATTGGTTACTCCGAAACCAAAAAAATCAAAAAAAGACAAGGATATTTTTGTCACTTCTTTAG
AAAAACAACTCGCCAAATCTCTTGGCTTAAAAGCAACTATTAAGTTGACATCACATCAGACTGGCCACTTGCAATTACCT
TTTGCTAATGAAGATGAACTAAACAGAATTATCAACAAGTTACTTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.039

100

0.58


Multiple sequence alignment