Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   FGK95_RS08305 Genome accession   NZ_LR590625
Coordinates   1647880..1648605 (-) Length   241 a.a.
NCBI ID   WP_003044963.1    Uniprot ID   A0A2D4DM13
Organism   Streptococcus canis strain B700072     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1642880..1653605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK95_RS08270 (SAMEA5186854_01668) rnpM 1642923..1643219 (-) 297 WP_003044945.1 RNase P modulator RnpM -
  FGK95_RS08275 (SAMEA5186854_01669) nusA 1643235..1644392 (-) 1158 WP_093999291.1 transcription termination factor NusA -
  FGK95_RS08280 (SAMEA5186854_01670) rimP 1644562..1645044 (-) 483 WP_093999292.1 ribosome maturation factor RimP -
  FGK95_RS08290 (SAMEA5186854_01672) trmB 1645362..1645997 (-) 636 WP_093999293.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FGK95_RS08295 (SAMEA5186854_01673) ccrZ 1645997..1646788 (-) 792 WP_003044956.1 cell cycle regulator CcrZ -
  FGK95_RS08300 (SAMEA5186854_01674) - 1646843..1647877 (-) 1035 WP_093999294.1 ABC transporter permease -
  FGK95_RS08305 (SAMEA5186854_01675) pptA 1647880..1648605 (-) 726 WP_003044963.1 ABC transporter ATP-binding protein Regulator
  FGK95_RS08310 (SAMEA5186854_01676) - 1648677..1649096 (+) 420 WP_093999295.1 HIT family protein -
  FGK95_RS08315 (SAMEA5186854_01677) - 1649093..1649410 (+) 318 WP_093999296.1 chemotaxis protein -
  FGK95_RS08320 (SAMEA5186854_01678) brpA 1649459..1650730 (-) 1272 WP_093999297.1 biofilm formation/cell division transcriptional regulator BrpA -
  FGK95_RS08325 (SAMEA5186854_01679) - 1650739..1651263 (-) 525 WP_003044971.1 GNAT family N-acetyltransferase -
  FGK95_RS08330 (SAMEA5186854_01680) tsaE 1651256..1651699 (-) 444 WP_039994873.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FGK95_RS08335 (SAMEA5186854_01681) - 1651887..1653347 (-) 1461 WP_093999298.1 NCS2 family permease -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26543.88 Da        Isoelectric Point: 4.8524

>NTDB_id=1127122 FGK95_RS08305 WP_003044963.1 1647880..1648605(-) (pptA) [Streptococcus canis strain B700072]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGEISIDGLTLAENPADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAKPFLDMFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIKTLEIEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLAELQATFGDPSASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1127122 FGK95_RS08305 WP_003044963.1 1647880..1648605(-) (pptA) [Streptococcus canis strain B700072]
ATGTTAAACATTGAAAATCTAACGGGAGGCTACCTTAATATTCCCGTTTTAAAAGAGGTTTCATTTTCTGTTGGCAATGG
AGAATTGGTCGGTTTAATCGGGTTAAATGGAGCTGGAAAGTCAACGACCATCAATGAAATTATTGGTTTTTTAAAACCCT
ACAAGGGAGAAATCTCCATTGACGGCCTTACGCTGGCTGAAAATCCAGCAGACTACCGTAAAAAAATTGGTTTTATCCCA
GAAACTCCTAGTCTTTACGAAGAATTAACCTTAGCAGAGCATATTAATACTGTGGCTATGGCCTACGATATTGATGTGGA
GTTGGCCCAGAAACGGGCAAAGCCTTTTTTAGACATGTTTCGCTTGACAGATAAACTCGACTGGTTTCCTGTGCATTTTT
CAAAGGGCATGAAGCAAAAAGTCATGATTATTTGTGCTTTTGTGATTGATCCCAGCTTGTTTATCCTTGATGAGCCTTTT
TTAGGGTTAGATCCACTAGCTATTTCGGACTTGATTAAGACTTTAGAGATTGAAAAAGCCAAAGGCAAATCGATTTTAAT
GAGTACTCACGTGCTAGACTCTGCTGAAAAAATGTGTGATCGTTTTGTGATTTTGCACCATGGTCAGGTGCGTGCTCAAG
GAACTCTTGCTGAGTTACAAGCGACCTTTGGAGATCCTTCGGCTAGCTTAAACGATATTTATTTGGCATTGACAAAAGAG
GGCTAG

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2D4DM13

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.732

99.17

0.751

  pptA Streptococcus thermophilus LMD-9

74.895

99.17

0.743


Multiple sequence alignment