Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FGK91_RS07290 Genome accession   NZ_LR590483
Coordinates   1411168..1411893 (-) Length   241 a.a.
NCBI ID   WP_023078675.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8318     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1406168..1416893
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK91_RS07255 (NCTC8318_01450) - 1406202..1406498 (-) 297 WP_002983486.1 YlxR family protein -
  FGK91_RS07260 (NCTC8318_01451) nusA 1406514..1407671 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  FGK91_RS07265 (NCTC8318_01452) rimP 1407846..1408382 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  FGK91_RS07275 (NCTC8318_01454) trmB 1408641..1409276 (-) 636 WP_023078685.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FGK91_RS07280 (NCTC8318_01455) - 1409276..1410067 (-) 792 WP_002983385.1 phosphotransferase family protein -
  FGK91_RS07285 (NCTC8318_01456) - 1410131..1411165 (-) 1035 WP_023078705.1 ABC transporter permease -
  FGK91_RS07290 (NCTC8318_01457) pptA 1411168..1411893 (-) 726 WP_023078675.1 ABC transporter ATP-binding protein Regulator
  FGK91_RS07295 (NCTC8318_01458) - 1411965..1412384 (+) 420 WP_002983376.1 HIT family protein -
  FGK91_RS07300 (NCTC8318_01459) - 1412381..1412737 (+) 357 WP_009880754.1 hypothetical protein -
  FGK91_RS07305 (NCTC8318_01460) - 1412848..1414122 (-) 1275 WP_020837594.1 LCP family protein -
  FGK91_RS07310 (NCTC8318_01461) - 1414131..1414655 (-) 525 WP_023078656.1 N-acetyltransferase -
  FGK91_RS07315 (NCTC8318_01462) tsaE 1414630..1415091 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FGK91_RS07320 (NCTC8318_01463) - 1415245..1416705 (-) 1461 WP_023078701.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26706.80 Da        Isoelectric Point: 4.5624

>NTDB_id=1127061 FGK91_RS07290 WP_023078675.1 1411168..1411893(-) (pptA) [Streptococcus pyogenes strain NCTC8318]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEVFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1127061 FGK91_RS07290 WP_023078675.1 1411168..1411893(-) (pptA) [Streptococcus pyogenes strain NCTC8318]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGTTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment