Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   FGL10_RS04660 Genome accession   NZ_LR590477
Coordinates   898899..899360 (+) Length   153 a.a.
NCBI ID   WP_036475109.1    Uniprot ID   -
Organism   Neisseria lactamica strain NCTC10617     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 893899..904360
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL10_RS04630 (NCTC10617_00814) - 894605..895819 (-) 1215 WP_003710572.1 pyridoxal phosphate-dependent aminotransferase -
  FGL10_RS04635 (NCTC10617_00815) - 895908..896117 (-) 210 WP_003710575.1 tautomerase family protein -
  FGL10_RS04640 - 896225..896410 (+) 186 Protein_831 DUF4198 domain-containing protein -
  FGL10_RS04645 (NCTC10617_00816) - 896468..897733 (-) 1266 WP_003710579.1 Glu/Leu/Phe/Val family dehydrogenase -
  FGL10_RS04655 (NCTC10617_00817) - 898135..898842 (+) 708 WP_003710582.1 phosphoglycolate phosphatase -
  FGL10_RS04660 (NCTC10617_00818) recX 898899..899360 (+) 462 WP_036475109.1 recombination regulator RecX Regulator
  FGL10_RS04665 (NCTC10617_00819) - 899434..899595 (+) 162 WP_025456733.1 hypothetical protein -
  FGL10_RS04675 (NCTC10617_00820) - 899748..900230 (+) 483 WP_003710586.1 acyl-CoA thioesterase -
  FGL10_RS04680 (NCTC10617_00821) - 900629..901645 (-) 1017 WP_003710592.1 peptidoglycan DD-metalloendopeptidase family protein -
  FGL10_RS04685 (NCTC10617_00822) surE 901748..902494 (-) 747 WP_003710594.1 5'/3'-nucleotidase SurE -
  FGL10_RS04690 (NCTC10617_00823) - 902508..904064 (-) 1557 WP_003710595.1 TerC family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17767.08 Da        Isoelectric Point: 10.2829

>NTDB_id=1126932 FGL10_RS04660 WP_036475109.1 898899..899360(+) (recX) [Neisseria lactamica strain NCTC10617]
MKPQKSLRARAMDILSRQEVSRLGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPNRSSEKQAAIAVLRKKFKQPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGY

Nucleotide


Download         Length: 462 bp        

>NTDB_id=1126932 FGL10_RS04660 WP_036475109.1 898899..899360(+) (recX) [Neisseria lactamica strain NCTC10617]
ATGAAACCCCAAAAATCACTCCGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCCTCGGTCTGAAGCG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAATGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTACGCCGAAGCCTATATCCGCAGCAAAAGCCGAAAACACGGCTCCCTGCGCCTGAAACAAGCCCTGGCTCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCAACCGCTCAAGCGAAAAACAGGCCGCCATAGCCGTGTTGCG
TAAAAAGTTCAAACAGCCCGCCGCCGACCTTAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

96.053

99.346

0.954

Multiple sequence alignment