Detailed information    

insolico Bioinformatically predicted

Overview


Name   tpc   Type   Machinery gene
Locus tag   FGL10_RS00690 Genome accession   NZ_LR590477
Coordinates   119863..120945 (-) Length   360 a.a.
NCBI ID   WP_003707893.1    Uniprot ID   D0W7T6
Organism   Neisseria lactamica strain NCTC10617     
Function   DNA processing; DNA transport into the cytoplasm (predicted from homology)   
DNA processing DNA binding and uptake

Genomic Context


Location: 114863..125945
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL10_RS00665 (NCTC10617_00111) - 116147..116773 (-) 627 WP_003707880.1 phosphoribosylanthranilate isomerase -
  FGL10_RS00670 (NCTC10617_00112) greB 116832..117323 (-) 492 WP_003707882.1 transcription elongation factor GreB -
  FGL10_RS00675 (NCTC10617_00113) purF 117423..118967 (-) 1545 WP_003713816.1 amidophosphoribosyltransferase -
  FGL10_RS00680 - 119114..119302 (+) 189 WP_003707888.1 hypothetical protein -
  FGL10_RS00685 (NCTC10617_00114) - 119373..119870 (-) 498 WP_003707891.1 CvpA family protein -
  FGL10_RS00690 (NCTC10617_00115) tpc 119863..120945 (-) 1083 WP_003707893.1 cell division protein FtsN Machinery gene
  FGL10_RS00695 (NCTC10617_00116) folC 120958..122232 (-) 1275 WP_036469381.1 bifunctional tetrahydrofolate synthase/dihydrofolate synthase -
  FGL10_RS00700 (NCTC10617_00117) - 122264..122710 (-) 447 WP_036474978.1 protein YgfX -
  FGL10_RS00705 (NCTC10617_00118) - 122715..123074 (-) 360 WP_002214147.1 hypothetical protein -
  FGL10_RS00710 (NCTC10617_00119) - 123147..123875 (-) 729 WP_003713803.1 amino acid ABC transporter ATP-binding protein -
  FGL10_RS00715 (NCTC10617_00120) - 123917..124372 (-) 456 WP_003707899.1 hypothetical protein -
  FGL10_RS00720 (NCTC10617_00121) - 124483..125052 (-) 570 WP_003707901.1 GTP pyrophosphokinase -
  FGL10_RS00725 (NCTC10617_00122) rsmA 125067..125846 (-) 780 WP_003707904.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 37771.00 Da        Isoelectric Point: 9.8084

>NTDB_id=1126913 FGL10_RS00690 WP_003707893.1 119863..120945(-) (tpc) [Neisseria lactamica strain NCTC10617]
MSENKQNEVLTGYEQLKRRNRRRLVTASCLVAASCILLAAALSSDPADSNPAPQAGETGATENQTANAAQAPALKSAAGN
GETAAGKPQDAAGGGKPADDGGISEPEDIGAPLVIINNRLDDSNIKGLEASAKPQPQEAAEKPQPEETAATAQAEAKQGA
AEKAQATADSTDTAAVEKPKRTAETKPQKAERAAEAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDKPVKEPKKSDKA
ESKKPAEKDSSDGKKHETAQKTDKADKAKTAGPGKTAEKEKSDKTGKKAAIQAGYAEKERALSLQRKMKAAGIDSTITEI
MTDNGKVYRVKSSNYKNARDAERDLNKLRVHGIAGQVTNE

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=1126913 FGL10_RS00690 WP_003707893.1 119863..120945(-) (tpc) [Neisseria lactamica strain NCTC10617]
ATGTCCGAAAACAAACAAAACGAAGTCCTGACCGGTTACGAACAACTCAAACGGCGCAACCGCCGCCGCCTCGTAACGGC
AAGCTGCCTGGTTGCCGCCTCCTGCATCCTGCTGGCGGCCGCCCTCAGCTCCGATCCCGCCGACAGCAACCCTGCCCCGC
AGGCCGGCGAAACCGGCGCAACGGAAAACCAAACGGCAAACGCGGCACAAGCCCCGGCTTTGAAATCCGCCGCCGGAAAC
GGGGAAACCGCCGCCGGCAAACCGCAGGACGCGGCAGGCGGGGGCAAACCCGCCGACGACGGCGGAATCAGCGAACCCGA
AGACATCGGCGCACCGCTGGTCATCATCAACAACCGGCTCGACGACAGCAATATCAAAGGTTTGGAGGCATCCGCAAAAC
CGCAACCGCAAGAAGCCGCCGAAAAACCGCAACCGGAAGAAACCGCCGCAACCGCACAGGCGGAGGCAAAACAAGGCGCG
GCCGAAAAAGCGCAGGCAACTGCCGACAGTACGGATACGGCAGCGGTTGAAAAACCGAAACGCACTGCCGAAACAAAACC
GCAAAAAGCGGAACGCGCCGCCGAAGCCAAGCCCAAAGCCAAAGAAACCAAAACCGCCGAAAAAGTTGCCGACAAACCGA
AAACTGCCGCCGAAAAAACCAAACCGGATACGGCCAAATCCGACAAGCCGGTAAAAGAACCGAAAAAATCCGATAAGGCA
GAAAGCAAAAAACCGGCTGAAAAAGACAGTTCGGACGGCAAAAAACACGAAACGGCGCAAAAAACCGACAAGGCGGACAA
AGCCAAAACCGCCGGACCAGGAAAAACCGCCGAAAAAGAAAAATCCGACAAAACCGGCAAAAAAGCCGCCATTCAGGCAG
GTTATGCCGAAAAAGAACGCGCCTTGAGCCTCCAGCGCAAAATGAAGGCGGCGGGCATCGATTCGACCATTACCGAAATT
ATGACCGACAACGGCAAAGTTTACCGCGTCAAATCAAGCAACTATAAAAACGCAAGGGATGCCGAACGCGATTTGAACAA
ATTGCGCGTACACGGTATCGCCGGCCAGGTAACGAATGAATAG

Domains


Predicted by InterproScan.

(287-358)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB D0W7T6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tpc Neisseria gonorrhoeae MS11

83.657

100

0.839


Multiple sequence alignment