Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   FGK94_RS06315 Genome accession   NZ_LR590471
Coordinates   1344814..1345587 (-) Length   257 a.a.
NCBI ID   WP_012678752.1    Uniprot ID   A0A7Z9D1T8
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC11854     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1339814..1350587
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK94_RS06290 (NCTC11854_01289) ychF 1339976..1341091 (-) 1116 WP_043030285.1 redox-regulated ATPase YchF -
  FGK94_RS06295 (NCTC11854_01290) - 1341175..1341537 (-) 363 WP_195757350.1 helix-turn-helix domain-containing protein -
  FGK94_RS06300 (NCTC11854_01291) - 1341660..1341857 (-) 198 WP_012677176.1 DUF951 domain-containing protein -
  FGK94_RS06305 (NCTC11854_01292) dnaN 1341935..1343071 (-) 1137 WP_043030284.1 DNA polymerase III subunit beta -
  FGK94_RS06310 (NCTC11854_01293) dnaA 1343228..1344580 (-) 1353 WP_014622072.1 chromosomal replication initiator protein DnaA -
  FGK94_RS06315 (NCTC11854_01294) spo0J 1344814..1345587 (-) 774 WP_012678752.1 ParB/RepB/Spo0J family partition protein Regulator
  FGK94_RS06320 (NCTC11854_01295) htrA 1345707..1346930 (-) 1224 WP_012516520.1 S1C family serine protease Regulator
  FGK94_RS06325 (NCTC11854_01296) rlmH 1347140..1347619 (+) 480 WP_012678751.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29134.76 Da        Isoelectric Point: 9.7975

>NTDB_id=1126884 FGK94_RS06315 WP_012678752.1 1344814..1345587(-) (spo0J) [Streptococcus equi subsp. zooepidemicus strain NCTC11854]
MTEILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGERRFKAAKLAGLQKIPAIVK
EISTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHEDIATYMGKSRPYISNTIRLLQLPDVIRQAIEDGTISAG
HARALLSLSTSKEQELYFHNILDQGLSVRQIEQLVKTKHPPKKRNKHKTIFVKSLEKELSKSLGLPVALSLQKNDSGQLQ
LSFSNQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=1126884 FGK94_RS06315 WP_012678752.1 1344814..1345587(-) (spo0J) [Streptococcus equi subsp. zooepidemicus strain NCTC11854]
ATGACAGAAATCCTAATGCACATTCCTATCGAGGATATTGTGGCAAATCCTTATCAACCACGTCTTCAATTTAATCAAAA
AGAGCTTGAGGAGCTGGCACATTCCATTCAGGCTAATGGTTTGATTCAACCAATCATTGTCAGAAAATCTGATGTATTTG
GCTATGAATTAGTCGCTGGAGAACGACGCTTTAAAGCAGCCAAGCTGGCAGGACTTCAAAAGATTCCAGCAATTGTTAAG
GAAATCTCTACTCTTGAGAGCATGCAGCAGGCCATCGTAGAAAACCTACAGCGCTCAAATTTAAATGCTATTGAAGAGGC
TAAGGCCTATCAATTACTTATTGATAAAAATAAGATGACCCATGAGGACATCGCGACATACATGGGAAAATCACGCCCTT
ATATCAGCAACACCATCAGACTGCTGCAATTACCAGACGTTATTAGACAAGCGATTGAGGACGGTACCATTAGCGCCGGC
CATGCAAGAGCTTTATTATCCTTGTCAACATCAAAAGAGCAGGAGCTGTATTTTCACAACATTCTGGATCAAGGCTTAAG
CGTTAGGCAAATCGAACAGCTGGTAAAGACTAAGCATCCCCCCAAAAAAAGAAACAAACATAAAACCATTTTTGTGAAGT
CTTTAGAAAAAGAGCTCTCAAAATCATTAGGATTACCTGTGGCATTGTCTCTCCAAAAAAATGACAGTGGGCAGCTGCAA
CTGTCATTTTCAAACCAAGAAGAATTGAACAGAATTATCAACAAGCTGCTTTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(148-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Z9D1T8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

62.109

99.611

0.619

Multiple sequence alignment