Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FGK94_RS04195 Genome accession   NZ_LR590471
Coordinates   914870..915595 (-) Length   241 a.a.
NCBI ID   WP_012678429.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC11854     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 909870..920595
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK94_RS04165 (NCTC11854_00859) rimP 910470..910952 (-) 483 WP_042670147.1 ribosome maturation factor RimP -
  FGK94_RS04180 (NCTC11854_00863) trmB 912343..912978 (-) 636 WP_043029411.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FGK94_RS04185 (NCTC11854_00864) ccrZ 912978..913769 (-) 792 WP_012515084.1 cell cycle regulator CcrZ -
  FGK94_RS04190 (NCTC11854_00865) - 913832..914866 (-) 1035 WP_043029410.1 ABC transporter permease -
  FGK94_RS04195 (NCTC11854_00866) pptA 914870..915595 (-) 726 WP_012678429.1 ABC transporter ATP-binding protein Regulator
  FGK94_RS10335 (NCTC11854_00867) - 916132..916473 (+) 342 WP_195757355.1 hypothetical protein -
  FGK94_RS04205 (NCTC11854_00868) - 916929..917348 (+) 420 WP_012515079.1 HIT family protein -
  FGK94_RS04210 (NCTC11854_00869) - 917345..917647 (+) 303 WP_043029409.1 hypothetical protein -
  FGK94_RS04215 (NCTC11854_00870) brpA 917813..919075 (-) 1263 WP_043029408.1 biofilm formation/cell division transcriptional regulator BrpA -
  FGK94_RS04220 (NCTC11854_00871) - 919076..919603 (-) 528 WP_043029407.1 GNAT family N-acetyltransferase -
  FGK94_RS04225 (NCTC11854_00872) tsaE 919596..920039 (-) 444 WP_037580090.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26506.80 Da        Isoelectric Point: 4.8615

>NTDB_id=1126868 FGK94_RS04195 WP_012678429.1 914870..915595(-) (pptA) [Streptococcus equi subsp. zooepidemicus strain NCTC11854]
MLNIENVTGGYLNIPVLKDISFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGRISIDGLTLAEHEADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAHKRAEPFLELFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAIADLIKALEVEKAKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLADLQAVFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1126868 FGK94_RS04195 WP_012678429.1 914870..915595(-) (pptA) [Streptococcus equi subsp. zooepidemicus strain NCTC11854]
ATGTTAAACATTGAGAATGTCACTGGAGGCTACCTTAATATTCCAGTTTTGAAGGATATTAGCTTTTCTGTTGGAAATGG
AGAGCTAGTAGGGCTTATTGGTCTAAATGGTGCTGGTAAGTCAACAACGATTAATGAAATTATTGGGTTTTTAAAGCCAT
ATAAGGGAAGGATTTCCATTGATGGCTTAACCTTGGCGGAGCATGAAGCTGATTATCGCAAGAAAATTGGCTTTATCCCA
GAAACACCAAGCCTGTATGAGGAGCTGACCTTAGCAGAGCATATCAATACGGTAGCTATGGCCTACGATATTGATGTGGA
GCTGGCACATAAGCGAGCTGAGCCCTTCTTAGAGCTGTTTCGCTTGACGGATAAGTTGGATTGGTTTCCGGTGCATTTTT
CTAAGGGAATGAAGCAAAAGGTTATGATTATTTGCGCTTTTGTCATTGACCCTAGTCTTTTTATTCTTGATGAGCCCTTT
TTGGGGCTTGACCCCTTAGCAATTGCTGATTTGATTAAGGCTTTAGAGGTTGAAAAGGCAAAGGGCAAGTCAATTCTAAT
GAGTACCCATGTGCTGGATTCGGCAGAAAAAATGTGTGACCGTTTTGTGATATTGCATCAGGGACAGGTGCGTGCACAAG
GGACTCTGGCGGATTTGCAGGCAGTCTTTGGAGATGCTTCAGCTAGTCTTAATGACATTTACCTAGCGCTGACAAAAGAG
GGGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.477

99.17

0.739
  pptA Streptococcus thermophilus LMD-9

73.64

99.17

0.73

Multiple sequence alignment