Detailed information NTG1126819

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FGL36_RS04565
• Genome accession: NZ_LR590467
• Coordinates: 909942..911045 (-)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain NCTC13251
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 904942..916045

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL36_RS04535 (NCTC13251_00902)	-	904982..905932 (+)	951	WP_005013747.1	IS481-like element IS481 family transposase	-
FGL36_RS04540 (NCTC13251_00903)	-	905926..906411 (+)	486	Protein_882	phosphonate ABC transporter ATP-binding protein	-
FGL36_RS04545 (NCTC13251_00904)	phnE	906429..907298 (+)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
FGL36_RS04550 (NCTC13251_00905)	phnE	907295..908116 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
FGL36_RS20645	-	908298..909895 (+)	1598	Protein_885	CYTH and CHAD domain-containing protein	-
FGL36_RS04565 (NCTC13251_00908)	pilA	909942..911045 (-)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
FGL36_RS04570 (NCTC13251_00909)	rsmD	911121..911741 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FGL36_RS04575 (NCTC13251_00910)	coaD	911762..912271 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
FGL36_RS04580 (NCTC13251_00911)	-	912326..912577 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
FGL36_RS04585 (NCTC13251_00912)	-	912641..913774 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
FGL36_RS04590 (NCTC13251_00913)	-	913782..914168 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=1126819 FGL36_RS04565 WP_023853086.1 909942..911045(-) (pilA) [Bordetella pertussis strain NCTC13251]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=1126819 FGL36_RS04565 WP_023853086.1 909942..911045(-) (pilA) [Bordetella pertussis strain NCTC13251]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507