Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FGK81_RS07185 Genome accession   NZ_LR590466
Coordinates   1411077..1411886 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8193     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1406077..1416886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK81_RS07175 (NCTC8193_01430) smc 1406402..1409941 (-) 3540 WP_011889080.1 chromosome segregation protein SMC -
  FGK81_RS07180 (NCTC8193_01431) rnc 1409942..1410634 (-) 693 WP_002985639.1 ribonuclease III -
  FGK81_RS07185 (NCTC8193_01432) vicX 1411077..1411886 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  FGK81_RS07190 (NCTC8193_01433) vicK 1411890..1413242 (-) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FGK81_RS07195 (NCTC8193_01434) vicR 1413235..1413945 (-) 711 WP_002985645.1 response regulator YycF Regulator
  FGK81_RS07200 (NCTC8193_01435) - 1414107..1415141 (-) 1035 WP_011184290.1 DUF3114 domain-containing protein -
  FGK81_RS07205 (NCTC8193_01436) - 1415197..1416444 (-) 1248 WP_011284594.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=1126789 FGK81_RS07185 WP_002985641.1 1411077..1411886(-) (vicX) [Streptococcus pyogenes strain NCTC8193]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1126789 FGK81_RS07185 WP_002985641.1 1411077..1411886(-) (vicX) [Streptococcus pyogenes strain NCTC8193]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTTAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCACATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment