Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   FGK81_RS00655 Genome accession   NZ_LR590466
Coordinates   122023..122736 (-) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain NCTC8193     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 117023..127736
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK81_RS09780 (NCTC8193_00126) - 117195..117341 (+) 147 WP_002982210.1 hypothetical protein -
  FGK81_RS00620 (NCTC8193_00127) - 117370..118305 (+) 936 WP_011889220.1 Gfo/Idh/MocA family protein -
  FGK81_RS00625 (NCTC8193_00128) - 118314..118823 (+) 510 WP_002991345.1 GNAT family N-acetyltransferase -
  FGK81_RS00630 (NCTC8193_00129) nrdG 118823..119437 (+) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  FGK81_RS00635 (NCTC8193_00130) yaaA 119611..120342 (-) 732 WP_011889219.1 peroxide stress protein YaaA -
  FGK81_RS00640 (NCTC8193_00131) - 120384..121232 (-) 849 Protein_109 VOC family protein -
  FGK81_RS00645 (NCTC8193_00132) - 121418..121744 (+) 327 WP_011185054.1 winged helix-turn-helix transcriptional regulator -
  FGK81_RS00655 (NCTC8193_00133) treR 122023..122736 (-) 714 WP_002982243.1 trehalose operon repressor Regulator
  FGK81_RS00660 (NCTC8193_00134) treP 122947..124971 (+) 2025 WP_011889218.1 PTS system trehalose-specific EIIBC component -
  FGK81_RS00665 (NCTC8193_00135) treC 125038..126666 (+) 1629 WP_011889217.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=1126765 FGK81_RS00655 WP_002982243.1 122023..122736(-) (treR) [Streptococcus pyogenes strain NCTC8193]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1126765 FGK81_RS00655 WP_002982243.1 122023..122736(-) (treR) [Streptococcus pyogenes strain NCTC8193]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTTTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment