Detailed information    

insolico Bioinformatically predicted

Overview


Name   HI0659   Type   Machinery gene
Locus tag   FGK83_RS01640 Genome accession   NZ_LR590465
Coordinates   326449..326745 (+) Length   98 a.a.
NCBI ID   WP_005650837.1    Uniprot ID   Q4QMQ7
Organism   Haemophilus influenzae strain NCTC8468     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 321449..331745
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK83_RS01630 (NCTC8468_00320) - 323021..326128 (+) 3108 WP_171007148.1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -
  FGK83_RS01635 - 326268..326456 (+) 189 Protein_315 type II toxin-antitoxin system RelE/ParE family toxin -
  FGK83_RS01640 (NCTC8468_00321) HI0659 326449..326745 (+) 297 WP_005650837.1 helix-turn-helix domain-containing protein Machinery gene
  FGK83_RS01645 (NCTC8468_00322) - 326929..328845 (+) 1917 WP_138171502.1 ABC transporter ATP-binding protein -
  FGK83_RS01650 (NCTC8468_00323) - 328855..329391 (+) 537 WP_138171503.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein -
  FGK83_RS01655 (NCTC8468_00324) - 329407..329958 (+) 552 WP_138171504.1 Sua5/YciO/YrdC/YwlC family protein -
  FGK83_RS01660 (NCTC8468_00325) aroE 329962..330768 (+) 807 WP_138171505.1 shikimate dehydrogenase -
  FGK83_RS01665 (NCTC8468_00326) - 330780..331532 (+) 753 WP_048951646.1 DUF3800 domain-containing protein -

Sequence


Protein


Download         Length: 98 a.a.        Molecular weight: 11092.94 Da        Isoelectric Point: 10.3139

>NTDB_id=1126735 FGK83_RS01640 WP_005650837.1 326449..326745(+) (HI0659) [Haemophilus influenzae strain NCTC8468]
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Nucleotide


Download         Length: 297 bp        

>NTDB_id=1126735 FGK83_RS01640 WP_005650837.1 326449..326745(+) (HI0659) [Haemophilus influenzae strain NCTC8468]
ATGAATAAAATCAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGCGAAAG
TAATTTGCGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAGCAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAACTTGAAACGTTGTTAAAATTG
CTCGCTCCCTTGGGGAAAACCCTGTCGATTGTGCCTCTAAGGGTAAAAAATGCCTAA

Domains


Predicted by InterproScan.

(41-89)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q4QMQ7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

100

100

1


Multiple sequence alignment