Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   E0F32_RS02700 Genome accession   NZ_LR216050
Coordinates   484845..485111 (+) Length   88 a.a.
NCBI ID   WP_001808618.1    Uniprot ID   A0A0E9GZQ4
Organism   Streptococcus pneumoniae strain GPSC10 substr. ST2013 isolate GPS_US_PATH396-sc-2296505     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 479845..490111
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E0F32_RS02680 (SAMEA3431333_00495) - 480059..480568 (+) 510 WP_000619941.1 GNAT family N-acetyltransferase -
  E0F32_RS02685 (SAMEA3431333_00496) pheT 480645..483047 (+) 2403 WP_130885925.1 phenylalanine--tRNA ligase subunit beta -
  E0F32_RS02690 (SAMEA3431333_00497) - 483115..484116 (-) 1002 WP_024477913.1 endonuclease/exonuclease/phosphatase family protein -
  E0F32_RS02695 (SAMEA3431333_00498) - 484272..484719 (+) 448 Protein_509 IS30 family transposase -
  E0F32_RS02700 (SAMEA3431333_00499) HI0659 484845..485111 (+) 267 WP_001808618.1 helix-turn-helix domain-containing protein Machinery gene
  E0F32_RS02705 (SAMEA3431333_00500) metE 485372..487621 (+) 2250 WP_024477912.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  E0F32_RS02710 (SAMEA3431333_00501) metF 487685..488551 (+) 867 WP_024477911.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9622.15 Da        Isoelectric Point: 4.4893

>NTDB_id=1126102 E0F32_RS02700 WP_001808618.1 484845..485111(+) (HI0659) [Streptococcus pneumoniae strain GPSC10 substr. ST2013 isolate GPS_US_PATH396-sc-2296505]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAI
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=1126102 E0F32_RS02700 WP_001808618.1 484845..485111(+) (HI0659) [Streptococcus pneumoniae strain GPSC10 substr. ST2013 isolate GPS_US_PATH396-sc-2296505]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAATC
GTCCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.039

87.5

0.534

Multiple sequence alignment