Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | E0E43_RS11810 | Genome accession | NZ_LR215974 |
| Coordinates | 2545868..2546977 (-) | Length | 369 a.a. |
| NCBI ID | WP_130915437.1 | Uniprot ID | - |
| Organism | Chryseobacterium taihuense strain 3012STDY6944375 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 2540868..2551977
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0E43_RS11785 (NCTC12078_02412) | - | 2541793..2542173 (-) | 381 | WP_130914648.1 | group III truncated hemoglobin | - |
| E0E43_RS17675 | - | 2542494..2542676 (+) | 183 | Protein_2339 | ion channel | - |
| E0E43_RS17605 | - | 2543057..2543281 (+) | 225 | WP_317127558.1 | hypothetical protein | - |
| E0E43_RS11795 (NCTC12078_02414) | - | 2543262..2543750 (+) | 489 | WP_130914649.1 | YkgJ family cysteine cluster protein | - |
| E0E43_RS11800 (NCTC12078_02415) | - | 2543827..2544129 (-) | 303 | WP_130914650.1 | iron chaperone | - |
| E0E43_RS11805 (NCTC12078_02416) | gdhA | 2544317..2545675 (-) | 1359 | WP_130914651.1 | NADP-specific glutamate dehydrogenase | - |
| E0E43_RS11810 (NCTC12078_02417) | dprA | 2545868..2546977 (-) | 1110 | WP_130915437.1 | DNA-processing protein DprA | Machinery gene |
| E0E43_RS11815 (NCTC12078_02418) | - | 2547007..2547774 (-) | 768 | WP_130914652.1 | rhomboid family intramembrane serine protease | - |
| E0E43_RS11820 (NCTC12078_02419) | - | 2547934..2548863 (+) | 930 | WP_130914653.1 | DUF3078 domain-containing protein | - |
| E0E43_RS11825 (NCTC12078_02420) | sufD | 2548997..2550301 (-) | 1305 | WP_130914654.1 | Fe-S cluster assembly protein SufD | - |
| E0E43_RS17500 | - | 2550350..2550505 (-) | 156 | WP_262708491.1 | hypothetical protein | - |
| E0E43_RS17505 (NCTC12078_02421) | - | 2550502..2550747 (-) | 246 | WP_262708492.1 | four helix bundle protein | - |
| E0E43_RS11835 (NCTC12078_02422) | sufC | 2550778..2551521 (-) | 744 | WP_130914655.1 | Fe-S cluster assembly ATPase SufC | - |
| E0E43_RS11840 (NCTC12078_02423) | uraH | 2551553..2551960 (-) | 408 | WP_089744590.1 | hydroxyisourate hydrolase | - |
Sequence
Protein
Download Length: 369 a.a. Molecular weight: 41350.12 Da Isoelectric Point: 7.4506
>NTDB_id=1126016 E0E43_RS11810 WP_130915437.1 2545868..2546977(-) (dprA) [Chryseobacterium taihuense strain 3012STDY6944375]
MYKEEHLYSVALRQCSYIGDIIFSKLVRTFGSAKNVWETSKKDLAQVDGIGKKTVSDIGNPEHLKFAEKELQFCGKNDIR
INLRHQKDFPFLLNECDDAPAILYQKGIFDPDLKCVSIVGTRNMTSYGKKFIEDFFTETKNSRYQSISGLALGVDKEVHE
YSMENGIPTTAVLAHGFHTLYPSKNRKLSEKILEENGALLTEFNTTRKPDRENFIQRNRIVAGISPATIVVETAFGGGSV
STAAFANGYNRDVYALPGKITDKYSQGCNQLIFQHKATAISTIKDLIESLGFHQSSETIGELFPQSTVSIRLTENQEEIY
RSILANPYISLDDLAEKKSLPSHKILPIILELELLGKVKSFSGRQFTAL
MYKEEHLYSVALRQCSYIGDIIFSKLVRTFGSAKNVWETSKKDLAQVDGIGKKTVSDIGNPEHLKFAEKELQFCGKNDIR
INLRHQKDFPFLLNECDDAPAILYQKGIFDPDLKCVSIVGTRNMTSYGKKFIEDFFTETKNSRYQSISGLALGVDKEVHE
YSMENGIPTTAVLAHGFHTLYPSKNRKLSEKILEENGALLTEFNTTRKPDRENFIQRNRIVAGISPATIVVETAFGGGSV
STAAFANGYNRDVYALPGKITDKYSQGCNQLIFQHKATAISTIKDLIESLGFHQSSETIGELFPQSTVSIRLTENQEEIY
RSILANPYISLDDLAEKKSLPSHKILPIILELELLGKVKSFSGRQFTAL
Nucleotide
Download Length: 1110 bp
>NTDB_id=1126016 E0E43_RS11810 WP_130915437.1 2545868..2546977(-) (dprA) [Chryseobacterium taihuense strain 3012STDY6944375]
ATGTATAAAGAAGAACATCTCTATTCTGTCGCTTTAAGGCAGTGCAGTTATATAGGCGACATCATATTCAGCAAACTGGT
AAGAACTTTCGGCAGCGCAAAAAATGTTTGGGAGACTTCTAAAAAAGACCTTGCTCAAGTTGACGGGATTGGAAAAAAAA
CAGTTTCGGATATTGGCAATCCTGAACACCTGAAATTTGCTGAAAAAGAATTACAATTTTGCGGGAAAAATGATATCCGC
ATCAATTTACGGCACCAGAAAGACTTTCCGTTTCTGCTGAATGAATGTGATGATGCTCCTGCAATTTTATATCAAAAAGG
AATTTTTGATCCTGATTTAAAATGCGTAAGCATTGTGGGAACAAGAAATATGACTTCTTACGGAAAAAAATTTATTGAAG
ATTTTTTTACTGAAACAAAAAACAGCAGATATCAGTCAATAAGCGGTTTAGCATTAGGCGTTGATAAAGAGGTACATGAA
TATTCTATGGAGAATGGCATTCCCACTACAGCCGTTTTAGCTCACGGGTTTCATACTTTATATCCCTCAAAAAACAGAAA
ACTTTCAGAAAAAATTCTAGAAGAAAACGGAGCTTTACTTACCGAGTTTAATACCACCCGGAAACCTGACCGGGAAAATT
TCATCCAAAGAAACAGGATTGTTGCAGGAATTTCACCAGCTACAATTGTGGTAGAAACAGCATTTGGAGGTGGATCTGTG
AGCACAGCAGCATTTGCAAACGGCTATAATCGTGATGTATACGCACTTCCGGGAAAAATTACAGACAAATATAGCCAGGG
ATGCAATCAGCTTATATTCCAGCACAAAGCTACTGCCATTTCTACTATTAAGGATCTTATAGAATCTTTAGGTTTTCATC
AGTCGTCGGAGACTATAGGTGAGCTTTTTCCTCAGAGTACAGTTTCAATTCGGCTTACGGAAAATCAAGAAGAAATATAC
AGATCAATTTTAGCTAATCCTTATATAAGCTTAGATGATTTAGCTGAAAAAAAATCCCTGCCTTCACATAAAATCTTACC
TATAATTCTTGAACTTGAGCTTTTAGGTAAAGTAAAATCATTTTCAGGGAGGCAATTTACTGCTTTGTAA
ATGTATAAAGAAGAACATCTCTATTCTGTCGCTTTAAGGCAGTGCAGTTATATAGGCGACATCATATTCAGCAAACTGGT
AAGAACTTTCGGCAGCGCAAAAAATGTTTGGGAGACTTCTAAAAAAGACCTTGCTCAAGTTGACGGGATTGGAAAAAAAA
CAGTTTCGGATATTGGCAATCCTGAACACCTGAAATTTGCTGAAAAAGAATTACAATTTTGCGGGAAAAATGATATCCGC
ATCAATTTACGGCACCAGAAAGACTTTCCGTTTCTGCTGAATGAATGTGATGATGCTCCTGCAATTTTATATCAAAAAGG
AATTTTTGATCCTGATTTAAAATGCGTAAGCATTGTGGGAACAAGAAATATGACTTCTTACGGAAAAAAATTTATTGAAG
ATTTTTTTACTGAAACAAAAAACAGCAGATATCAGTCAATAAGCGGTTTAGCATTAGGCGTTGATAAAGAGGTACATGAA
TATTCTATGGAGAATGGCATTCCCACTACAGCCGTTTTAGCTCACGGGTTTCATACTTTATATCCCTCAAAAAACAGAAA
ACTTTCAGAAAAAATTCTAGAAGAAAACGGAGCTTTACTTACCGAGTTTAATACCACCCGGAAACCTGACCGGGAAAATT
TCATCCAAAGAAACAGGATTGTTGCAGGAATTTCACCAGCTACAATTGTGGTAGAAACAGCATTTGGAGGTGGATCTGTG
AGCACAGCAGCATTTGCAAACGGCTATAATCGTGATGTATACGCACTTCCGGGAAAAATTACAGACAAATATAGCCAGGG
ATGCAATCAGCTTATATTCCAGCACAAAGCTACTGCCATTTCTACTATTAAGGATCTTATAGAATCTTTAGGTTTTCATC
AGTCGTCGGAGACTATAGGTGAGCTTTTTCCTCAGAGTACAGTTTCAATTCGGCTTACGGAAAATCAAGAAGAAATATAC
AGATCAATTTTAGCTAATCCTTATATAAGCTTAGATGATTTAGCTGAAAAAAAATCCCTGCCTTCACATAAAATCTTACC
TATAATTCTTGAACTTGAGCTTTTAGGTAAAGTAAAATCATTTTCAGGGAGGCAATTTACTGCTTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Riemerella anatipestifer ATCC 11845 = DSM 15868 |
54.372 |
99.187 |
0.539 |