Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   EXC59_RS01320 Genome accession   NZ_LR215050
Coordinates   267379..269208 (+) Length   609 a.a.
NCBI ID   WP_035369651.1    Uniprot ID   A0A449BIH5
Organism   Acholeplasma hippikon strain NCTC10172     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 262379..274208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXC59_RS01290 (NCTC10172_00257) - 263274..263528 (+) 255 WP_035369644.1 hypothetical protein -
  EXC59_RS01295 (NCTC10172_00258) - 263573..264073 (+) 501 WP_162164049.1 hypothetical protein -
  EXC59_RS01300 (NCTC10172_00259) - 264094..264534 (+) 441 WP_035369646.1 hypothetical protein -
  EXC59_RS01305 (NCTC10172_00260) - 264648..265079 (+) 432 WP_035369647.1 hypothetical protein -
  EXC59_RS01310 (NCTC10172_00261) - 265196..265633 (+) 438 WP_035369648.1 MarR family winged helix-turn-helix transcriptional regulator -
  EXC59_RS01315 (NCTC10172_00262) rcrP 265635..267386 (+) 1752 WP_035369650.1 ABC transporter ATP-binding protein Regulator
  EXC59_RS01320 (NCTC10172_00263) rcrQ 267379..269208 (+) 1830 WP_035369651.1 ABC transporter ATP-binding protein Regulator
  EXC59_RS01325 (NCTC10172_00264) - 269236..269913 (-) 678 WP_035369652.1 YaaA family protein -
  EXC59_RS01330 (NCTC10172_00265) - 269980..271137 (+) 1158 WP_035369653.1 sugar MFS transporter -
  EXC59_RS01335 (NCTC10172_00266) - 271214..271915 (+) 702 WP_162849164.1 DsbA family oxidoreductase -
  EXC59_RS01340 (NCTC10172_00267) - 272082..272924 (+) 843 WP_035369654.1 GNAT family N-acetyltransferase -
  EXC59_RS01345 (NCTC10172_00268) - 272934..274109 (+) 1176 WP_035369655.1 glycosyltransferase -

Sequence

Protein


Download         Length: 609 a.a.        Molecular weight: 68194.11 Da        Isoelectric Point: 8.8317

>NTDB_id=1125910 EXC59_RS01320 WP_035369651.1 267379..269208(+) (rcrQ) [Acholeplasma hippikon strain NCTC10172]
MNNDEQKPRQRTSSHGHGGMGVGEKAKDFKKSFKKLLNYVRTYRAILILAIILAFIGTILNLLGPDMIKTITNEITAGMT
DIVNGINIKKIDRIAITLVIFYILGFIFNYIQGFFMVTIGQRVSNKFRKEMAQKINKVPFKYYDTNNIGDILSRFTNDVD
TIAQTFAQSFGTLVTAITMFIGSIVMMFYTNWLMALTAILSSVIGFVFMATIIKGSQKHFKTYQGQLGALNGHIEETYTG
HTIVKAYNGENEAKEQFETMNRKLFVSGWKAQFFSGLMMPLMSFVGNIGYVAVIIVGALLVSNNKIEFGVVLAFIIYVRL
FTQPLSQMAQSMNALQSGTAASERVFEFLEEKELADESHKTKQLTNVKGDVKFDHVKFGYDENKIIIKDFSANIKAGQKV
AIVGPTGAGKTTLVNLLMRFYEVNEGSISIDGVDTKELTRENVHNLFGMVLQDTWLFEGTVYENLVFNKKDVDAETVKNI
CKTVGIHFFINTLPEKYNTILTDKLNLSAGQKQLLTIARAMIQNAPLLIFDEATSSIDTRTEVLIQDAMDALMKGRTSFV
IAHRLSTIKNADLILVMKEGDVIESGTHDQLLAANGFYAELYNSQFEEK

Nucleotide


Download         Length: 1830 bp        

>NTDB_id=1125910 EXC59_RS01320 WP_035369651.1 267379..269208(+) (rcrQ) [Acholeplasma hippikon strain NCTC10172]
ATGAATAATGATGAACAAAAACCACGTCAAAGAACATCTAGTCATGGTCATGGCGGCATGGGCGTCGGCGAAAAAGCTAA
AGACTTCAAAAAATCCTTCAAAAAATTATTAAATTATGTAAGAACTTATAGAGCCATCTTAATTCTTGCGATTATCCTTG
CATTCATCGGAACAATCCTAAACCTTTTAGGACCTGATATGATTAAAACAATCACTAACGAAATCACTGCTGGTATGACT
GATATCGTTAATGGTATTAATATTAAGAAAATTGATAGAATTGCAATCACATTAGTTATCTTCTATATTTTAGGTTTTAT
CTTTAACTATATTCAAGGTTTCTTCATGGTTACAATTGGTCAAAGAGTTTCTAACAAGTTTAGAAAAGAAATGGCACAAA
AAATCAATAAAGTTCCATTTAAGTACTATGATACTAATAATATCGGTGATATCTTAAGTAGATTCACAAATGACGTTGAT
ACAATTGCACAAACATTTGCACAAAGCTTTGGTACATTAGTAACTGCGATTACCATGTTTATTGGGTCAATTGTTATGAT
GTTCTATACAAACTGGTTAATGGCACTTACAGCAATTTTATCTTCAGTAATTGGTTTTGTCTTTATGGCAACAATCATTA
AGGGTTCACAAAAACACTTTAAGACATATCAAGGTCAATTAGGTGCTTTAAATGGACACATTGAAGAAACATATACAGGA
CATACAATCGTTAAGGCTTATAACGGAGAAAATGAAGCAAAAGAACAATTTGAAACTATGAATAGAAAATTATTTGTTAG
TGGTTGGAAAGCTCAATTCTTCTCAGGATTAATGATGCCTTTAATGAGTTTTGTTGGTAATATTGGATATGTTGCAGTTA
TTATTGTTGGTGCATTATTAGTTTCTAACAATAAGATTGAGTTTGGTGTTGTCTTAGCATTTATTATTTACGTTAGATTA
TTTACACAACCATTATCACAAATGGCTCAATCAATGAACGCTTTACAATCAGGTACAGCTGCATCAGAACGTGTATTTGA
ATTCTTAGAAGAAAAAGAATTAGCAGATGAATCACACAAGACTAAACAATTAACAAATGTAAAAGGTGATGTTAAGTTTG
ATCATGTTAAATTTGGATATGATGAAAACAAAATTATTATTAAAGACTTCTCTGCTAACATTAAAGCAGGTCAAAAAGTT
GCCATCGTTGGTCCAACAGGAGCAGGTAAGACAACTTTAGTTAACCTATTAATGAGATTCTATGAAGTAAACGAAGGTTC
AATTTCAATTGACGGTGTTGATACTAAAGAATTAACAAGAGAAAACGTTCATAACTTATTTGGTATGGTTCTACAAGATA
CTTGGTTATTTGAAGGTACTGTTTATGAAAACTTAGTCTTCAATAAGAAAGATGTAGATGCTGAAACTGTCAAGAATATT
TGTAAGACAGTAGGTATTCACTTCTTTATTAATACATTACCTGAAAAATACAATACAATCTTAACTGACAAGTTAAACTT
ATCTGCAGGACAAAAGCAATTATTAACAATTGCTCGTGCAATGATTCAAAATGCTCCATTATTAATCTTCGATGAAGCAA
CTTCATCAATTGATACAAGAACTGAAGTATTAATTCAAGATGCAATGGATGCATTAATGAAGGGTAGAACTTCATTCGTA
ATTGCGCATAGATTAAGTACAATTAAAAATGCTGATTTAATTCTAGTAATGAAAGAAGGGGATGTCATTGAAAGTGGCAC
TCACGACCAATTACTTGCAGCAAACGGATTCTACGCAGAATTATATAATTCACAATTTGAAGAAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(388-535)

ABC transporter transmembrane region (ABC_membrane)

(47-325)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A449BIH5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

55.938

95.402

0.534

Multiple sequence alignment