Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   EXC59_RS01315 Genome accession   NZ_LR215050
Coordinates   265635..267386 (+) Length   583 a.a.
NCBI ID   WP_035369650.1    Uniprot ID   A0A449BIG5
Organism   Acholeplasma hippikon strain NCTC10172     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 260635..272386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXC59_RS01280 (NCTC10172_00255) - 260778..261488 (-) 711 WP_129614234.1 helix-turn-helix domain-containing protein -
  EXC59_RS01285 (NCTC10172_00256) - 261666..263174 (+) 1509 WP_035369642.1 InlB B-repeat-containing protein -
  EXC59_RS01290 (NCTC10172_00257) - 263274..263528 (+) 255 WP_035369644.1 hypothetical protein -
  EXC59_RS01295 (NCTC10172_00258) - 263573..264073 (+) 501 WP_162164049.1 hypothetical protein -
  EXC59_RS01300 (NCTC10172_00259) - 264094..264534 (+) 441 WP_035369646.1 hypothetical protein -
  EXC59_RS01305 (NCTC10172_00260) - 264648..265079 (+) 432 WP_035369647.1 hypothetical protein -
  EXC59_RS01310 (NCTC10172_00261) - 265196..265633 (+) 438 WP_035369648.1 MarR family winged helix-turn-helix transcriptional regulator -
  EXC59_RS01315 (NCTC10172_00262) rcrP 265635..267386 (+) 1752 WP_035369650.1 ABC transporter ATP-binding protein Regulator
  EXC59_RS01320 (NCTC10172_00263) rcrQ 267379..269208 (+) 1830 WP_035369651.1 ABC transporter ATP-binding protein Regulator
  EXC59_RS01325 (NCTC10172_00264) - 269236..269913 (-) 678 WP_035369652.1 YaaA family protein -
  EXC59_RS01330 (NCTC10172_00265) - 269980..271137 (+) 1158 WP_035369653.1 sugar MFS transporter -
  EXC59_RS01335 (NCTC10172_00266) - 271214..271915 (+) 702 WP_162849164.1 DsbA family oxidoreductase -

Sequence

Protein


Download         Length: 583 a.a.        Molecular weight: 64935.79 Da        Isoelectric Point: 9.4271

>NTDB_id=1125909 EXC59_RS01315 WP_035369650.1 265635..267386(+) (rcrP) [Acholeplasma hippikon strain NCTC10172]
MLKILKHIKTTEWLWILVSILLIGGQVWLELEIPTYMGTISKMALEGNANIWDIVVEGLKMLGLAFGSLISAVIVGLIFA
RISSRFSARLRSMMFTKTADFSMEEINAFSTPSLITRSTNDITQVQNMISMGAQLLLKAPILAIWSIYKISGSQWQFTAI
TAGAILAISIVLVVIIFVAVPRFKRIQKNTDELNKYSRENLAGLRVIKAYNAEKFQTKKIDTVNDVLMTDGLLAGRIMSL
ISPTMALVLSGVSLSIYWIGAHLIDGIPFVNMLDRVDIYQQMIIFSQYAMQVIMAFMMLVMIFIILPRAQVSAGRILEVL
NKKTKIKDGSQPLKEHVKTLEFNNVSFQYPDASDPVLENISFKANKGQTVAIIGATGAGKSTMINLIPRFYDVTEGEILI
NGQNIKQFKAHDLRKKIGYISQQAFLFSGTIGSNVNYGLEEEKELDYALEIAQASDFVNSLEEKGNSRVSQAGKNFSGGQ
KQRLSIARAIQRDAEVLIFDDSFSALDYRTDRNLRNALKENLNNQITLIVAQRIGTIKNADVILVLDEGKIVGAGTHKEL
LKDNKVYREIALSQLSEEELANE

Nucleotide


Download         Length: 1752 bp        

>NTDB_id=1125909 EXC59_RS01315 WP_035369650.1 265635..267386(+) (rcrP) [Acholeplasma hippikon strain NCTC10172]
ATGCTAAAAATACTAAAACATATTAAGACAACTGAATGGCTGTGGATATTAGTTTCTATTCTCTTAATTGGTGGTCAAGT
CTGGCTAGAACTTGAAATCCCTACTTATATGGGAACAATTTCAAAAATGGCTTTAGAAGGCAACGCCAATATTTGGGATA
TCGTAGTAGAAGGCTTAAAGATGCTAGGTCTAGCATTTGGAAGTTTAATTTCAGCAGTAATCGTTGGCTTAATTTTCGCA
AGAATTTCATCTAGATTCTCAGCTAGATTAAGATCAATGATGTTTACAAAGACAGCAGACTTCTCAATGGAAGAAATCAA
TGCATTTTCTACACCAAGTTTAATCACTCGTTCTACAAACGATATTACACAAGTACAAAACATGATTTCAATGGGAGCAC
AATTATTATTAAAGGCTCCAATCCTTGCAATATGGAGTATTTATAAAATTTCGGGTTCACAATGGCAATTTACAGCAATC
ACTGCAGGTGCAATTTTAGCTATCTCAATCGTGTTAGTTGTGATTATTTTCGTTGCTGTACCAAGATTTAAACGTATTCA
AAAGAATACAGATGAGTTAAACAAGTATTCAAGAGAAAACCTTGCAGGTTTACGTGTTATTAAAGCTTATAACGCTGAAA
AGTTCCAAACTAAGAAAATTGACACAGTAAATGATGTTTTAATGACTGACGGTTTACTTGCTGGTAGAATTATGAGTTTA
ATCAGTCCAACAATGGCACTTGTTTTATCAGGTGTAAGCTTATCAATTTATTGGATTGGTGCACATTTAATTGATGGTAT
TCCATTTGTGAATATGTTAGACCGTGTAGATATTTATCAACAAATGATTATCTTCTCACAATATGCAATGCAAGTTATCA
TGGCATTCATGATGTTAGTAATGATCTTCATTATCTTACCAAGAGCACAAGTATCAGCTGGTCGTATCCTAGAAGTATTA
AATAAGAAAACAAAAATTAAAGATGGTTCTCAACCATTAAAAGAGCATGTTAAAACACTTGAATTTAACAATGTTTCATT
CCAATATCCTGATGCATCTGACCCAGTATTAGAAAATATTAGTTTCAAGGCAAACAAAGGTCAAACAGTTGCGATTATCG
GTGCAACAGGTGCTGGTAAATCAACAATGATTAATTTAATTCCTAGATTCTATGATGTAACAGAAGGTGAAATCTTAATT
AATGGTCAAAATATTAAACAATTTAAGGCACATGATTTAAGAAAGAAAATTGGTTACATTTCACAACAAGCATTCTTATT
CAGTGGTACAATCGGTTCTAACGTTAACTACGGTTTAGAAGAAGAAAAAGAATTAGATTATGCACTAGAAATTGCACAAG
CATCAGATTTTGTTAACAGCTTAGAAGAAAAAGGCAATTCAAGAGTTTCTCAAGCTGGTAAGAACTTCTCTGGTGGTCAA
AAACAAAGATTATCAATTGCACGTGCGATTCAAAGAGATGCTGAAGTATTAATCTTCGATGACTCATTCTCTGCACTTGA
CTATCGTACAGATCGTAATTTAAGAAATGCGTTAAAAGAAAACTTAAACAATCAAATTACATTAATTGTTGCACAAAGAA
TCGGTACAATTAAAAATGCTGATGTTATCTTAGTCTTAGATGAAGGTAAGATTGTTGGTGCTGGTACGCATAAAGAATTA
CTAAAAGATAATAAAGTCTACAGAGAAATTGCATTATCACAACTATCAGAGGAGGAATTAGCAAATGAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-265)

ABC transporter (ABC_tran)

(357-502)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A449BIG5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

49.164

100

0.504

Multiple sequence alignment