Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   EQB44_RS09095 Genome accession   NZ_LR135474
Coordinates   1777218..1778900 (-) Length   560 a.a.
NCBI ID   WP_002286651.1    Uniprot ID   A0A132P3G9
Organism   Enterococcus faecium isolate E9101     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1772218..1783900
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQB44_RS09065 ftsL 1773485..1773886 (-) 402 WP_002294542.1 cell division protein FtsL -
  EQB44_RS09070 rsmH 1773898..1774857 (-) 960 WP_002297994.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  EQB44_RS09075 mraZ 1774878..1775309 (-) 432 WP_002297995.1 division/cell wall cluster transcriptional repressor MraZ -
  EQB44_RS09080 - 1775479..1775847 (-) 369 WP_127821271.1 DUF3397 domain-containing protein -
  EQB44_RS09085 - 1776018..1776974 (+) 957 WP_002286649.1 magnesium transporter CorA family protein -
  EQB44_RS09090 - 1777047..1777163 (+) 117 WP_002291876.1 DUF4044 domain-containing protein -
  EQB44_RS09095 recN 1777218..1778900 (-) 1683 WP_002286651.1 DNA repair protein RecN Machinery gene
  EQB44_RS09100 - 1778918..1779367 (-) 450 WP_002286653.1 arginine repressor -
  EQB44_RS09105 - 1779474..1780292 (-) 819 WP_087626504.1 TlyA family RNA methyltransferase -
  EQB44_RS09110 - 1780301..1781191 (-) 891 WP_002286656.1 polyprenyl synthetase family protein -
  EQB44_RS09115 - 1781193..1781417 (-) 225 WP_002286657.1 exodeoxyribonuclease VII small subunit -
  EQB44_RS09120 xseA 1781422..1782759 (-) 1338 WP_087626503.1 exodeoxyribonuclease VII large subunit -
  EQB44_RS09125 - 1782760..1783614 (-) 855 WP_087626502.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 560 a.a.        Molecular weight: 63377.82 Da        Isoelectric Point: 4.6049

>NTDB_id=1125634 EQB44_RS09095 WP_002286651.1 1777218..1778900(-) (recN) [Enterococcus faecium isolate E9101]
MLQEISITNFAIIPELRLSFHEGMTALTGETGAGKSIIIDALGLLAGGRGSSDYIRQGAEKCVLEGLFELPKQEGFSELM
VELGIETDEDNLIVRRDMSLTGKNVCRVNGHIITLANLRRIGSYLVDIQGQNEHQELLQPESHLALLDRFGDVAFQQKKK
SYQQEYISYRELEKRVRKVQQNEKSYVQRIDMLHFQQEEIAAADLQVGEEEKLKEEREKLSNYQKIADGLAAGYGALTNN
EQNSVDGVGLAVSELQGIAHLDVEYEAIYENIQSAYYLLQDAIGDMSRQIDLLELDESRLEEVTQRLELIRQLKRKYGES
IESILAYYDEITEELASSDFSEGQLDKMKEELEQKELLLQQQAADLHEARKKIAKELEKSILHELKSLYMENTEFEVRFL
KEENRQLNHDGFDQIEFYITTNPGEPLKPLVKVASGGELSRMLLALKTIFSSEQGVTSIIFDEVDTGVSGRVAQAIADKI
SQISKYSQVLCITHLPQVAAVADYQYYIVKAVIDGRTQTSVSELKTKEREEEIARMLAGSEITKLTLEHAKELLKLAKRT

Nucleotide


Download         Length: 1683 bp        

>NTDB_id=1125634 EQB44_RS09095 WP_002286651.1 1777218..1778900(-) (recN) [Enterococcus faecium isolate E9101]
ATGCTACAAGAAATCAGTATTACTAACTTTGCGATTATTCCGGAATTGCGGCTTTCTTTTCACGAAGGAATGACTGCGCT
GACCGGAGAGACTGGTGCGGGTAAATCCATTATTATCGATGCTTTAGGTCTGTTAGCAGGAGGAAGAGGTTCAAGCGATT
ATATACGTCAAGGAGCAGAAAAATGTGTGCTTGAAGGGTTGTTTGAACTACCAAAACAAGAAGGATTCTCTGAACTGATG
GTTGAATTAGGGATCGAAACAGATGAGGACAATCTGATTGTTCGACGGGATATGTCCTTAACTGGAAAAAATGTTTGTCG
AGTGAATGGTCATATTATCACACTAGCTAATCTGAGAAGAATCGGCAGTTATTTAGTAGATATCCAAGGACAAAACGAAC
ATCAGGAACTGCTCCAGCCTGAATCACATCTTGCTTTATTGGATCGTTTTGGAGATGTAGCTTTCCAACAGAAGAAAAAG
AGTTATCAGCAAGAATATATCTCTTATCGTGAGCTGGAAAAAAGGGTACGAAAAGTGCAGCAAAATGAAAAATCCTATGT
TCAGAGAATAGATATGCTCCATTTCCAGCAAGAAGAAATAGCTGCTGCTGATTTGCAAGTCGGAGAAGAAGAGAAATTAA
AAGAAGAAAGAGAAAAACTTAGCAATTATCAAAAAATTGCTGATGGATTAGCTGCAGGTTACGGAGCACTGACGAATAAT
GAACAAAACAGTGTAGATGGTGTTGGCTTGGCCGTTTCAGAACTGCAAGGGATCGCCCATCTAGATGTGGAGTATGAAGC
AATTTATGAAAATATCCAAAGTGCTTACTATTTGCTGCAAGATGCAATCGGCGATATGAGTCGTCAGATTGATTTATTGG
AGTTAGATGAGAGTCGTTTAGAAGAAGTGACGCAACGTTTAGAATTAATCCGACAGTTGAAACGTAAATACGGCGAATCC
ATTGAGTCAATATTGGCTTACTATGACGAAATCACCGAAGAGCTAGCTTCTTCTGATTTTTCAGAAGGTCAATTGGACAA
AATGAAAGAGGAACTAGAGCAAAAAGAGCTTCTACTTCAGCAACAAGCCGCAGATCTTCATGAAGCGCGTAAAAAAATCG
CAAAAGAATTGGAAAAATCCATTCTGCATGAATTGAAAAGTCTGTATATGGAAAACACTGAGTTTGAGGTACGTTTCTTA
AAAGAAGAAAATAGACAATTGAATCATGATGGATTTGACCAAATCGAATTTTACATTACGACCAATCCAGGAGAGCCACT
GAAGCCTTTGGTGAAAGTCGCTTCTGGTGGCGAACTGTCTCGGATGTTGCTTGCTTTGAAAACTATTTTTTCTTCTGAGC
AAGGTGTGACAAGTATTATTTTTGATGAAGTGGATACAGGTGTGAGCGGAAGAGTTGCACAAGCCATCGCAGATAAAATT
TCTCAAATATCGAAATACTCTCAAGTTTTGTGCATCACTCATCTGCCTCAAGTTGCTGCAGTCGCCGACTATCAATATTA
TATTGTGAAAGCAGTGATTGATGGACGTACGCAAACTTCTGTTTCAGAGTTGAAAACAAAAGAAAGAGAAGAAGAAATTG
CACGTATGCTGGCTGGAAGTGAGATTACAAAACTCACACTTGAACATGCAAAAGAACTATTGAAACTCGCAAAAAGGACC
TGA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A132P3G9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

49.123

100

0.5

Multiple sequence alignment