Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BTK_RS22560 | Genome accession | NZ_CP004870 |
| Coordinates | 4352678..4353721 (-) | Length | 347 a.a. |
| NCBI ID | WP_001013180.1 | Uniprot ID | A0A9X5WLU9 |
| Organism | Bacillus thuringiensis serovar kurstaki str. HD-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4347678..4358721
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BTK_RS22515 (BTK_22355) | - | 4348109..4348309 (-) | 201 | WP_000106083.1 | YqzE family protein | - |
| BTK_RS22520 (BTK_22360) | - | 4348348..4348845 (-) | 498 | WP_000836650.1 | shikimate kinase | - |
| BTK_RS22525 (BTK_22365) | - | 4348961..4349611 (-) | 651 | WP_000183862.1 | 2OG-Fe(II) oxygenase | - |
| BTK_RS22530 (BTK_22370) | comGG | 4349788..4350159 (-) | 372 | WP_001231273.1 | competence type IV pilus minor pilin ComGG | - |
| BTK_RS22535 (BTK_22375) | comGF | 4350156..4350626 (-) | 471 | WP_000923099.1 | competence type IV pilus minor pilin ComGF | - |
| BTK_RS22540 (BTK_22380) | - | 4350596..4350898 (-) | 303 | WP_000829473.1 | hypothetical protein | - |
| BTK_RS22545 (BTK_22385) | comGD | 4350891..4351346 (-) | 456 | WP_000813142.1 | competence type IV pilus minor pilin ComGD | - |
| BTK_RS22550 (BTK_22390) | comGC | 4351343..4351642 (-) | 300 | WP_001178686.1 | competence type IV pilus major pilin ComGC | - |
| BTK_RS22555 (BTK_22395) | comGB | 4351654..4352685 (-) | 1032 | WP_000475193.1 | competence type IV pilus assembly protein ComGB | - |
| BTK_RS22560 (BTK_22400) | comGA | 4352678..4353721 (-) | 1044 | WP_001013180.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BTK_RS22565 (BTK_22405) | - | 4353927..4354622 (+) | 696 | WP_000434125.1 | helix-turn-helix domain-containing protein | - |
| BTK_RS22570 (BTK_22410) | - | 4354748..4354990 (+) | 243 | WP_000440721.1 | DUF2626 domain-containing protein | - |
| BTK_RS22575 (BTK_22415) | - | 4355097..4356491 (+) | 1395 | WP_001094330.1 | L-cystine transporter | - |
| BTK_RS22580 (BTK_22420) | - | 4356571..4356963 (-) | 393 | WP_000875388.1 | hypothetical protein | - |
| BTK_RS22585 (BTK_22425) | - | 4357051..4357266 (-) | 216 | WP_001008326.1 | DUF3912 family protein | - |
| BTK_RS22590 (BTK_22430) | - | 4357519..4357830 (+) | 312 | WP_001093237.1 | hypothetical protein | - |
| BTK_RS22595 (BTK_22435) | - | 4357865..4358353 (-) | 489 | WP_000764261.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39157.52 Da Isoelectric Point: 8.5482
>NTDB_id=112492 BTK_RS22560 WP_001013180.1 4352678..4353721(-) (comGA) [Bacillus thuringiensis serovar kurstaki str. HD-1]
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGHELKQALKEADGEC
VTYKHETLESSIRKGYALGFLEEDVYV
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGHELKQALKEADGEC
VTYKHETLESSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=112492 BTK_RS22560 WP_001013180.1 4352678..4353721(-) (comGA) [Bacillus thuringiensis serovar kurstaki str. HD-1]
ATGAATGGGATTGAAATTTTTGCGAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCAGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAGTGTATTGAAAAGGAGTTTGGAG
AAAAACTCGTCTCACATTTCAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGTTACTCGTGTTTACTGGACCGACTGGATCTGGGAAGACGACGACAATGTATGCATTATTAGAAGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGGGATGAGGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTACTATATGGACATGAGTTAAAACAAGCACTTAAAGAAGCAGATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGTTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGGATTGAAATTTTTGCGAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCAGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAGTGTATTGAAAAGGAGTTTGGAG
AAAAACTCGTCTCACATTTCAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGTTACTCGTGTTTACTGGACCGACTGGATCTGGGAAGACGACGACAATGTATGCATTATTAGAAGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGGGATGAGGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTACTATATGGACATGAGTTAAAACAAGCACTTAAAGAAGCAGATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGTTTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
55.908 |
100 |
0.559 |