Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   EL351_RS09520 Genome accession   NZ_LR135169
Coordinates   1864657..1866339 (-) Length   560 a.a.
NCBI ID   WP_002286651.1    Uniprot ID   A0A132P3G9
Organism   Enterococcus faecium isolate E2079     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1859657..1871339
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL351_RS09490 ftsL 1860931..1861332 (-) 402 WP_126305451.1 cell division protein FtsL -
  EL351_RS09495 rsmH 1861337..1862296 (-) 960 WP_002297994.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  EL351_RS09500 mraZ 1862317..1862748 (-) 432 WP_002297995.1 division/cell wall cluster transcriptional repressor MraZ -
  EL351_RS09505 - 1862918..1863286 (-) 369 WP_002286647.1 DUF3397 domain-containing protein -
  EL351_RS09510 - 1863457..1864413 (+) 957 WP_002324426.1 magnesium transporter CorA family protein -
  EL351_RS09515 - 1864486..1864602 (+) 117 WP_002291876.1 DUF4044 domain-containing protein -
  EL351_RS09520 recN 1864657..1866339 (-) 1683 WP_002286651.1 DNA repair protein RecN Machinery gene
  EL351_RS09525 - 1866357..1866806 (-) 450 WP_002286653.1 arginine repressor -
  EL351_RS09530 - 1866913..1867731 (-) 819 WP_002286655.1 TlyA family RNA methyltransferase -
  EL351_RS09535 - 1867740..1868630 (-) 891 WP_002286656.1 polyprenyl synthetase family protein -
  EL351_RS09540 - 1868632..1868856 (-) 225 WP_002286657.1 exodeoxyribonuclease VII small subunit -
  EL351_RS09545 xseA 1868861..1870198 (-) 1338 WP_002326489.1 exodeoxyribonuclease VII large subunit -
  EL351_RS09550 - 1870199..1871053 (-) 855 WP_002286660.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 560 a.a.        Molecular weight: 63377.82 Da        Isoelectric Point: 4.6049

>NTDB_id=1124232 EL351_RS09520 WP_002286651.1 1864657..1866339(-) (recN) [Enterococcus faecium isolate E2079]
MLQEISITNFAIIPELRLSFHEGMTALTGETGAGKSIIIDALGLLAGGRGSSDYIRQGAEKCVLEGLFELPKQEGFSELM
VELGIETDEDNLIVRRDMSLTGKNVCRVNGHIITLANLRRIGSYLVDIQGQNEHQELLQPESHLALLDRFGDVAFQQKKK
SYQQEYISYRELEKRVRKVQQNEKSYVQRIDMLHFQQEEIAAADLQVGEEEKLKEEREKLSNYQKIADGLAAGYGALTNN
EQNSVDGVGLAVSELQGIAHLDVEYEAIYENIQSAYYLLQDAIGDMSRQIDLLELDESRLEEVTQRLELIRQLKRKYGES
IESILAYYDEITEELASSDFSEGQLDKMKEELEQKELLLQQQAADLHEARKKIAKELEKSILHELKSLYMENTEFEVRFL
KEENRQLNHDGFDQIEFYITTNPGEPLKPLVKVASGGELSRMLLALKTIFSSEQGVTSIIFDEVDTGVSGRVAQAIADKI
SQISKYSQVLCITHLPQVAAVADYQYYIVKAVIDGRTQTSVSELKTKEREEEIARMLAGSEITKLTLEHAKELLKLAKRT

Nucleotide


Download         Length: 1683 bp        

>NTDB_id=1124232 EL351_RS09520 WP_002286651.1 1864657..1866339(-) (recN) [Enterococcus faecium isolate E2079]
ATGCTACAAGAAATCAGTATTACTAACTTTGCGATTATTCCGGAATTGCGGCTTTCTTTTCACGAAGGAATGACCGCGCT
GACCGGAGAGACTGGTGCGGGTAAATCCATTATTATCGATGCTTTAGGTCTGTTAGCAGGAGGAAGAGGTTCAAGCGATT
ATATACGTCAAGGAGCAGAAAAATGCGTGCTTGAAGGGTTGTTTGAACTACCAAAACAAGAAGGATTCTCTGAACTGATG
GTTGAATTAGGGATCGAAACAGATGAGGACAATCTGATTGTTCGACGGGATATGTCCTTAACTGGAAAAAATGTTTGTCG
AGTGAATGGTCATATCATCACATTAGCTAATTTAAGAAGAATCGGTAGTTATTTAGTAGATATCCAAGGACAAAACGAAC
ATCAGGAACTGCTCCAGCCTGAATCACATCTTGCTTTATTGGATCGTTTTGGAGATGTAGCTTTCCAACAGAAGAAAAAG
AGTTATCAGCAAGAATATATCTCTTATCGTGAGCTGGAAAAAAGGGTACGAAAAGTGCAGCAAAATGAAAAATCCTATGT
TCAGAGAATAGATATGCTCCATTTCCAGCAAGAAGAAATAGCTGCTGCTGATTTGCAAGTCGGAGAAGAAGAGAAATTAA
AAGAAGAAAGAGAAAAACTTAGCAATTATCAAAAAATTGCTGATGGATTAGCTGCAGGTTACGGAGCACTGACGAATAAT
GAACAAAACAGTGTAGATGGTGTTGGCTTGGCCGTTTCAGAGCTGCAAGGGATCGCCCATCTAGATGTGGAGTATGAAGC
AATTTATGAAAATATCCAAAGTGCTTACTATTTGCTGCAAGATGCAATCGGCGATATGAGTCGTCAGATTGATTTATTGG
AGTTAGATGAGAGTCGTTTAGAAGAAGTTACGCAACGTTTAGAATTAATCCGACAGTTGAAACGTAAATACGGCGAATCT
ATTGAGTCAATATTGGCTTACTATGACGAAATCACCGAAGAGCTAGCTTCTTCTGATTTTTCAGAAGGTCAATTGGACAA
AATGAAAGAGGAACTAGAGCAAAAAGAGCTTCTACTTCAGCAACAAGCCGCAGATCTTCATGAAGCGCGTAAAAAAATCG
CAAAAGAATTGGAAAAATCCATTCTGCATGAATTGAAAAGTCTGTATATGGAAAACACTGAGTTTGAGGTACGTTTCTTA
AAAGAAGAAAATAGACAATTGAATCATGATGGATTTGACCAAATCGAATTTTACATTACGACCAATCCAGGAGAGCCACT
GAAGCCTTTGGTGAAAGTCGCTTCTGGTGGCGAACTGTCTCGGATGTTGCTTGCTTTGAAAACTATTTTTTCTTCTGAGC
AAGGTGTGACAAGTATTATTTTTGATGAAGTGGATACAGGTGTGAGCGGAAGAGTTGCACAAGCCATCGCAGATAAAATT
TCTCAAATATCGAAATACTCTCAAGTTTTGTGCATCACTCATCTGCCTCAAGTTGCTGCAGTCGCCGACTATCAATATTA
TATTGTGAAAGCAGTGATTGATGGACGTACGCAAACTTCTGTTTCAGAGTTGAAAACAAAAGAAAGAGAAGAAGAAATTG
CACGTATGCTGGCTGGAAGTGAGATTACAAAACTCACACTCGAACATGCAAAAGAACTATTGAAACTCGCAAAAAGGACC
TGA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A132P3G9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

49.123

100

0.5

Multiple sequence alignment