Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   YBT1520_RS07275 Genome accession   NZ_CP004858
Coordinates   1351015..1351191 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis serovar kurstaki str. YBT-1520     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1346015..1356191
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  YBT1520_RS07255 (YBT1520_06940) clpC 1346346..1348946 (+) 2601 WP_000365401.1 ATP-dependent chaperone ClpB Regulator
  YBT1520_RS07260 (YBT1520_06945) - 1348985..1349167 (-) 183 WP_001211116.1 YjzD family protein -
  YBT1520_RS07265 (YBT1520_06950) - 1349324..1350058 (+) 735 WP_000028691.1 hydrolase -
  YBT1520_RS07270 (YBT1520_06955) - 1350088..1350960 (+) 873 WP_000487722.1 NAD(P)-dependent oxidoreductase -
  YBT1520_RS07275 (YBT1520_06960) comZ 1351015..1351191 (+) 177 WP_001986215.1 ComZ family protein Regulator
  YBT1520_RS07280 (YBT1520_06970) fabH 1351729..1352661 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  YBT1520_RS07285 (YBT1520_06975) fabF 1352693..1353931 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  YBT1520_RS07290 (YBT1520_06980) - 1354038..1354826 (+) 789 WP_000513275.1 DUF2268 domain-containing putative Zn-dependent protease -
  YBT1520_RS07295 (YBT1520_06985) - 1354970..1355716 (+) 747 WP_000966128.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=112423 YBT1520_RS07275 WP_001986215.1 1351015..1351191(+) (comZ) [Bacillus thuringiensis serovar kurstaki str. YBT-1520]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=112423 YBT1520_RS07275 WP_001986215.1 1351015..1351191(+) (comZ) [Bacillus thuringiensis serovar kurstaki str. YBT-1520]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTACGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment