Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   EL283_RS02495 Genome accession   NZ_LR134534
Coordinates   457038..458204 (+) Length   388 a.a.
NCBI ID   WP_126418671.1    Uniprot ID   -
Organism   Campylobacter insulaenigrae strain NCTC12928     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 452038..463204
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL283_RS02470 (NCTC12928_00514) - 452289..452792 (+) 504 WP_039649259.1 adenylyl-sulfate kinase -
  EL283_RS02475 (NCTC12928_00515) - 452789..454816 (+) 2028 WP_126418668.1 capsular polysaccharide biosynthesis protein -
  EL283_RS02480 (NCTC12928_00516) - 454834..455628 (+) 795 WP_039649263.1 cytolethal distending toxin, subunit CdtA -
  EL283_RS02485 (NCTC12928_00517) - 455625..456437 (+) 813 WP_126418669.1 cytolethal distending toxin subunit B family protein -
  EL283_RS02490 (NCTC12928_00518) - 456447..457022 (+) 576 WP_126418670.1 cytolethal distending toxin subunit A -
  EL283_RS02495 (NCTC12928_00519) kpsS 457038..458204 (+) 1167 WP_126418671.1 capsule biosynthesis protein Regulator
  EL283_RS08025 (NCTC12928_00520) - 458209..459702 (-) 1494 WP_197721672.1 SGNH/GDSL hydrolase family protein -
  EL283_RS02505 (NCTC12928_00521) - 459865..461004 (+) 1140 WP_126418672.1 DUF829 domain-containing protein -
  EL283_RS02510 (NCTC12928_00522) - 461016..462389 (+) 1374 WP_126418673.1 cytochrome P450 -
  EL283_RS02515 (NCTC12928_00523) - 462386..462739 (+) 354 WP_039649275.1 hypothetical protein -

Sequence


Protein


Download         Length: 388 a.a.        Molecular weight: 46080.71 Da        Isoelectric Point: 10.0976

>NTDB_id=1124142 EL283_RS02495 WP_126418671.1 457038..458204(+) (kpsS) [Campylobacter insulaenigrae strain NCTC12928]
MNLEKKLKEFSKKNILLLQGPVGDFFYKISKKIPDANIYKVNFNGGDFAFYPFKSINYRGCFDKLQDFYQGILKEKKIDV
IIMYNDCRKIHELAIKVAKAMGVEVWIFEEGYIRPNFITFEKDGVNANSTLPRDKEFYLTRNKFNHEIKIKNFSSSFKNM
AFYAFLYWFFSALLAWYFNNSLHHRSLKFFDFIPWFVSLYRKKKYKISEKKVNAKIVSLKQKYFLAILQVFNDTQLSHHY
KKSTEKFIEELIISFANHAKAKSYLVFKHHPMDRGYKDYTELIEQLSVKYNVEGRILYVHDLHLPTLLSSARGTIVINST
VGLSALYHQCPLKVMGKAFYDIDGLTYQKSLHTFWKECRCYKPDARLHTKFRNYVIYKTQINGNFFKI

Nucleotide


Download         Length: 1167 bp        

>NTDB_id=1124142 EL283_RS02495 WP_126418671.1 457038..458204(+) (kpsS) [Campylobacter insulaenigrae strain NCTC12928]
ATGAATTTAGAAAAAAAACTTAAAGAATTTTCTAAAAAAAATATTTTATTGCTTCAAGGACCTGTTGGAGATTTTTTTTA
TAAAATTTCTAAAAAAATTCCCGATGCTAATATCTATAAAGTAAATTTTAATGGAGGAGATTTTGCATTTTATCCTTTTA
AAAGCATAAATTATAGAGGTTGTTTTGATAAGCTACAAGATTTTTATCAGGGTATATTAAAAGAAAAAAAAATTGACGTC
ATTATTATGTATAATGATTGCCGAAAAATTCACGAATTAGCTATAAAAGTAGCTAAAGCTATGGGTGTAGAAGTATGGAT
TTTTGAAGAAGGTTATATAAGACCAAATTTTATAACCTTTGAAAAAGATGGTGTAAATGCAAATTCTACCTTACCAAGAG
ATAAAGAATTTTATTTAACTCGTAATAAATTTAATCATGAAATTAAAATTAAAAATTTTTCAAGTTCATTTAAAAATATG
GCATTTTATGCTTTTTTATATTGGTTTTTTTCTGCTTTGTTGGCATGGTATTTTAATAATTCTTTGCATCATAGATCTTT
GAAATTTTTTGACTTTATTCCTTGGTTTGTATCTTTATATAGAAAGAAAAAGTATAAAATTTCAGAAAAAAAAGTTAACG
CAAAGATTGTTAGTTTAAAGCAAAAGTATTTTTTGGCAATTTTACAAGTTTTTAATGATACTCAACTCTCTCATCATTAT
AAAAAAAGTACTGAAAAATTTATAGAGGAATTGATTATTTCTTTTGCAAATCATGCAAAAGCTAAATCTTATCTCGTTTT
TAAACATCATCCTATGGATAGAGGTTATAAAGATTATACAGAATTGATAGAACAATTAAGTGTTAAGTATAATGTAGAGG
GTCGAATTTTATATGTACATGATTTGCATCTACCAACTCTTTTAAGTAGTGCTAGAGGAACTATTGTGATTAATAGTACT
GTAGGACTTTCTGCACTTTATCATCAATGTCCTTTGAAAGTTATGGGTAAAGCCTTTTATGACATAGATGGTTTGACTTA
TCAAAAGAGTCTACATACTTTTTGGAAAGAATGTAGATGTTATAAACCTGATGCTAGATTGCATACTAAATTTAGAAATT
ATGTTATTTATAAAACTCAAATTAATGGAAATTTTTTTAAAATATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

61.358

98.711

0.606


Multiple sequence alignment