Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   EL309_RS03345 Genome accession   NZ_LR134533
Coordinates   677446..677898 (+) Length   150 a.a.
NCBI ID   WP_004282760.1    Uniprot ID   A0A448VKT1
Organism   Neisseria weaveri strain NCTC12742     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 672446..682898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL309_RS03325 (NCTC12742_00652) - 673319..674815 (-) 1497 WP_004282764.1 TolC family protein -
  EL309_RS03330 - 675118..675312 (+) 195 WP_004282763.1 hypothetical protein -
  EL309_RS03335 (NCTC12742_00653) - 675336..676556 (+) 1221 WP_004282762.1 aspartate kinase -
  EL309_RS03340 (NCTC12742_00654) - 676676..677386 (+) 711 WP_004282761.1 phosphoglycolate phosphatase -
  EL309_RS03345 (NCTC12742_00655) recX 677446..677898 (+) 453 WP_004282760.1 recombination regulator RecX Regulator
  EL309_RS03350 (NCTC12742_00656) - 677941..678750 (+) 810 WP_004282759.1 alpha/beta fold hydrolase -
  EL309_RS03355 (NCTC12742_00657) - 678821..679462 (-) 642 WP_036494638.1 HI_0552 family protein -
  EL309_RS03360 (NCTC12742_00658) - 679541..680266 (-) 726 WP_004282757.1 amino acid ABC transporter ATP-binding protein -
  EL309_RS03365 (NCTC12742_00659) rsmA 680286..681065 (-) 780 WP_040669512.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -
  EL309_RS03370 (NCTC12742_00660) prpB 681456..682337 (+) 882 WP_004282755.1 methylisocitrate lyase -

Sequence

Protein


Download         Length: 150 a.a.        Molecular weight: 17855.26 Da        Isoelectric Point: 10.0911

>NTDB_id=1124110 EL309_RS03345 WP_004282760.1 677446..677898(+) (recX) [Neisseria weaveri strain NCTC12742]
MKPQKSLRARAMDILSRQEISRAELKRKLLRYSEDEEEIDRVLAEFAERNWQSDQRFAESYIHSKSKQHGRLRLKHALNA
KGVSEEDARAFLPDRRQELQTAISVLRKKFKHPDKDPKEIQKQMRFLAYRGFDMDTIHTAIKSDWAETEE

Nucleotide


Download         Length: 453 bp        

>NTDB_id=1124110 EL309_RS03345 WP_004282760.1 677446..677898(+) (recX) [Neisseria weaveri strain NCTC12742]
ATGAAGCCGCAAAAATCACTACGCGCCCGCGCCATGGACATACTTTCCCGACAGGAAATCAGCCGCGCCGAGCTCAAACG
CAAACTGTTGCGATACAGCGAAGACGAAGAAGAAATCGACCGGGTTTTGGCAGAGTTTGCCGAACGCAATTGGCAGTCCG
ACCAACGCTTCGCCGAATCCTATATCCACAGCAAAAGTAAACAACACGGCCGCCTGCGTCTTAAGCATGCCCTCAACGCC
AAAGGCGTCAGCGAAGAAGACGCACGCGCCTTCCTGCCCGACCGTCGGCAGGAACTGCAAACCGCCATCAGCGTTTTACG
CAAAAAATTCAAACACCCCGACAAAGACCCGAAAGAAATCCAAAAACAAATGCGCTTTCTCGCCTATCGCGGTTTCGATA
TGGACACCATCCATACCGCCATCAAAAGCGACTGGGCGGAAACCGAAGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(34-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A448VKT1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

66.667

100

0.667

Multiple sequence alignment