Detailed information NTG1124035

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: EL305_RS08850
• Genome accession: NZ_LR134528
• Coordinates: 1477041..1478306 (-)
• Length: 421 a.a.
• NCBI ID: WP_126418068.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain NCTC12163
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1472041..1483306

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL305_RS08835 (NCTC12163_01476)	-	1476168..1476452 (-)	285	WP_002216166.1	GIY-YIG nuclease family protein	-
EL305_RS08850 (NCTC12163_01477)	pilA	1477041..1478306 (-)	1266	WP_126418068.1	signal recognition particle-docking protein FtsY	Machinery gene
EL305_RS08855 (NCTC12163_01478)	msrAB	1478452..1480020 (+)	1569	WP_002216163.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
EL305_RS08860 (NCTC12163_01479)	-	1480122..1480607 (-)	486	WP_002225770.1	CinA family protein	-
EL305_RS08865 (NCTC12163_01480)	-	1480634..1481482 (-)	849	WP_002215243.1	mechanosensitive ion channel family protein	-
EL305_RS08870 (NCTC12163_01481)	-	1481576..1482577 (-)	1002	WP_002223261.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 45203.52 Da
• Isoelectric Point: 4.5891

>NTDB_id=1124035 EL305_RS08850 WP_126418068.1 1477041..1478306(-) (pilA) [Neisseria meningitidis strain NCTC12163]
MFSFFRRKKKQETPAPDEAQIQETAAKAESEVAQIVENIKEDAESLTESVKGQVESAVETVSGAVEQVKETVAEMLSEAE
EAAEKAAEQVEAAKEAVAETISEAVGQVKEAVATTEEHKLSWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELET
VLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGK
LAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHL
MEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGV
GEGIDDLRPFDARAFVDALLD

Nucleotide

• Length: 1266 bp

>NTDB_id=1124035 EL305_RS08850 WP_126418068.1 1477041..1478306(-) (pilA) [Neisseria meningitidis strain NCTC12163]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACTCCGGCTCCCGATGAGGCTCAAATTCAGGAAACCGCAGCAAA
AGCAGAATCTGAAGTTGCTCAAATAGTTGAAAATATTAAAGAAGATGCTGAATCTTTAACGGAAAGCGTCAAAGGGCAGG
TCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCTGTCTGAAGCAGAG
GAAGCGGCGGAAAAAGCAGCGGAACAAGTCGAAGCGGCGAAAGAAGCTGTTGCCGAAACCATCAGCGAGGCTGTCGGGCA
AGTTAAAGAAGCCGTTGCGACAACTGAAGAACACAAGCTCAGTTGGGCGGCGCGTTTGAAACAAGGTTTGACCAAATCGC
GCGACAAAATGGCGAAATCGCTGGCGGGCGTGTTCGGCGGCGGACAAATCGACGAAGATTTGTACGAAGAGCTGGAAACC
GTGCTGATTACCAGCGATATGGGCATGGAAGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGG
GCTGAAAGACGGCAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCTCTGGAGAAACCTTTGG
TTTTGCCCGAAACCAAAGAGCCGTTTGTCATCATGCTTGCCGGCATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAA
CTCGCCAAATATTTCCAAGCGCAGGGCAAATCTGTGCTGCTTGCCGCCGGCGATACTTTCCGCGCCGCCGCCCGTGAGCA
GCTTCAAGCTTGGGGCGAACGCAACAACGTAACCGTGATTTCGCAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATG
CCGTCCAAGCCGCCAAAGCGCGCGGCATCGACATTGTGCTGGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTG
ATGGAAGAAATCAAAAAAGTGAAACGCGTGCTGCAAAAAGCCATGCCCGACGCGCCGCACGAAATCATCGTCGTGCTTGA
TGCCAACATCGGGCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTAGGGCTGACCGGTTTAATCGTTACCA
AACTCGACGGCACGGCAAAAGGCGGCATCCTCGCCGCGCTTGCCTCCGACCGCCCCGTCCCCGTCCGCTATATCGGCGTG
GGCGAAGGCATAGACGATTTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (221-420)

• SRP54-type protein, helical bundle domain (SRP54_N) (136-202)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	93.349	100	0.933