Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   EL305_RS06565 Genome accession   NZ_LR134528
Coordinates   1121196..1121657 (+) Length   153 a.a.
NCBI ID   WP_002216872.1    Uniprot ID   A0A2J1SH93
Organism   Neisseria meningitidis strain NCTC12163     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1116196..1126657
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL305_RS06540 (NCTC12163_01100) - 1117320..1117529 (-) 210 WP_002212949.1 tautomerase family protein -
  EL305_RS06545 (NCTC12163_01101) - 1117874..1118680 (+) 807 WP_002212946.1 DUF4198 domain-containing protein -
  EL305_RS06550 (NCTC12163_01102) - 1118738..1120006 (-) 1269 WP_002216876.1 Glu/Leu/Phe/Val family dehydrogenase -
  EL305_RS06560 (NCTC12163_01103) - 1120413..1121123 (+) 711 WP_002226230.1 phosphoglycolate phosphatase -
  EL305_RS06565 (NCTC12163_01104) recX 1121196..1121657 (+) 462 WP_002216872.1 recombination regulator RecX Regulator
  EL305_RS06570 (NCTC12163_01105) - 1121731..1121892 (+) 162 WP_002237185.1 hypothetical protein -
  EL305_RS06580 (NCTC12163_01106) - 1122045..1122527 (+) 483 WP_002216871.1 acyl-CoA thioesterase -
  EL305_RS06585 (NCTC12163_01107) - 1122888..1124135 (-) 1248 WP_002234058.1 M23 family metallopeptidase -
  EL305_RS06590 (NCTC12163_01108) surE 1124391..1125137 (-) 747 WP_002237186.1 5'/3'-nucleotidase SurE -

Sequence


Protein


Download         Length: 153 a.a.        Molecular weight: 17717.03 Da        Isoelectric Point: 10.0960

>NTDB_id=1124032 EL305_RS06565 WP_002216872.1 1121196..1121657(+) (recX) [Neisseria meningitidis strain NCTC12163]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=1124032 EL305_RS06565 WP_002216872.1 1121196..1121657(+) (recX) [Neisseria meningitidis strain NCTC12163]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains


Predicted by InterproScan.

(30-143)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2J1SH93

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

98.039

100

0.98


Multiple sequence alignment