Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   EL323_RS02885 Genome accession   NZ_LR134526
Coordinates   510646..511107 (-) Length   153 a.a.
NCBI ID   WP_042743490.1    Uniprot ID   -
Organism   Neisseria meningitidis strain NCTC10026     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 505646..516107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL323_RS02860 (NCTC10026_00487) surE 507166..507912 (+) 747 WP_080542111.1 5'/3'-nucleotidase SurE -
  EL323_RS02865 (NCTC10026_00488) - 508168..509415 (+) 1248 WP_080542112.1 M23 family metallopeptidase -
  EL323_RS02870 (NCTC10026_00489) - 509776..510258 (-) 483 WP_002216871.1 acyl-CoA thioesterase -
  EL323_RS02880 (NCTC10026_00490) - 510411..510572 (-) 162 WP_015815718.1 hypothetical protein -
  EL323_RS02885 (NCTC10026_00491) recX 510646..511107 (-) 462 WP_042743490.1 recombination regulator RecX Regulator
  EL323_RS02890 (NCTC10026_00492) - 511180..511890 (-) 711 WP_080542113.1 phosphoglycolate phosphatase -
  EL323_RS02900 (NCTC10026_00493) - 512297..513562 (+) 1266 WP_080542114.1 Glu/Leu/Phe/Val family dehydrogenase -
  EL323_RS02905 (NCTC10026_00494) - 513620..514426 (-) 807 WP_002212946.1 DUF4198 domain-containing protein -
  EL323_RS02915 (NCTC10026_00495) - 514770..514979 (+) 210 WP_002212949.1 tautomerase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17712.06 Da        Isoelectric Point: 10.0727

>NTDB_id=1123961 EL323_RS02885 WP_042743490.1 510646..511107(-) (recX) [Neisseria meningitidis strain NCTC10026]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSHKLLPDRSSEKQAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=1123961 EL323_RS02885 WP_042743490.1 510646..511107(-) (recX) [Neisseria meningitidis strain NCTC10026]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGACGAAGAGACAAGCCACAAGCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

96.732

100

0.967

Multiple sequence alignment