Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   EL310_RS06425 Genome accession   NZ_LR134522
Coordinates   1094542..1095003 (+) Length   153 a.a.
NCBI ID   WP_002235024.1    Uniprot ID   Q9JTP4
Organism   Neisseria meningitidis strain NCTC3372     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1089542..1100003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL310_RS06400 (NCTC3372_01097) - 1090677..1090886 (-) 210 WP_002212949.1 tautomerase family protein -
  EL310_RS06405 (NCTC3372_01098) - 1091231..1092037 (+) 807 WP_002246280.1 DUF4198 domain-containing protein -
  EL310_RS06410 (NCTC3372_01099) - 1092095..1093360 (-) 1266 WP_002222259.1 Glu/Leu/Phe/Val family dehydrogenase -
  EL310_RS06420 (NCTC3372_01100) - 1093767..1094474 (+) 708 WP_002246281.1 phosphoglycolate phosphatase -
  EL310_RS06425 (NCTC3372_01101) recX 1094542..1095003 (+) 462 WP_002235024.1 recombination regulator RecX Regulator
  EL310_RS06430 (NCTC3372_01102) - 1095077..1095238 (+) 162 WP_002239941.1 hypothetical protein -
  EL310_RS06440 (NCTC3372_01103) - 1095391..1095873 (+) 483 WP_002212937.1 acyl-CoA thioesterase -
  EL310_RS06445 (NCTC3372_01104) - 1096234..1097481 (-) 1248 WP_002246283.1 peptidoglycan DD-metalloendopeptidase family protein -
  EL310_RS06450 (NCTC3372_01105) surE 1097584..1098330 (-) 747 WP_002246284.1 5'/3'-nucleotidase SurE -
  EL310_RS13810 (NCTC3372_01106) - 1098347..1099902 (-) 1556 Protein_1090 TerC family protein -

Sequence


Protein


Download         Length: 153 a.a.        Molecular weight: 17716.09 Da        Isoelectric Point: 10.0960

>NTDB_id=1123864 EL310_RS06425 WP_002235024.1 1094542..1095003(+) (recX) [Neisseria meningitidis strain NCTC3372]
MKPQKSLRARAMDILSRQELSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKLAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=1123864 EL310_RS06425 WP_002235024.1 1094542..1095003(+) (recX) [Neisseria meningitidis strain NCTC3372]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAACTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACTGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains


Predicted by InterproScan.

(30-143)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q9JTP4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

96.732

100

0.967


Multiple sequence alignment