Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   EL276_RS08040 Genome accession   NZ_LR134516
Coordinates   1742225..1744264 (+) Length   679 a.a.
NCBI ID   WP_126304942.1    Uniprot ID   A0A448UD89
Organism   Neisseria animaloris strain NCTC12227     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1737225..1749264
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL276_RS08025 (NCTC12227_01633) grxC 1739010..1739276 (+) 267 WP_085391172.1 glutaredoxin 3 -
  EL276_RS08030 (NCTC12227_01634) secB 1739342..1739776 (+) 435 WP_085391186.1 protein-export chaperone SecB -
  EL276_RS08035 (NCTC12227_01635) - 1739934..1742036 (+) 2103 WP_126304941.1 TonB-dependent receptor -
  EL276_RS08040 (NCTC12227_01636) recG 1742225..1744264 (+) 2040 WP_126304942.1 ATP-dependent DNA helicase RecG Machinery gene
  EL276_RS08045 (NCTC12227_01637) - 1744431..1746389 (+) 1959 WP_126304943.1 tetratricopeptide repeat protein -
  EL276_RS08050 (NCTC12227_01638) - 1746495..1747004 (-) 510 WP_126304944.1 MliC family protein -
  EL276_RS08055 (NCTC12227_01639) dxs 1747187..1749085 (+) 1899 WP_126304945.1 1-deoxy-D-xylulose-5-phosphate synthase -

Sequence

Protein


Download         Length: 679 a.a.        Molecular weight: 75474.28 Da        Isoelectric Point: 8.2417

>NTDB_id=1123735 EL276_RS08040 WP_126304942.1 1742225..1744264(+) (recG) [Neisseria animaloris strain NCTC12227]
MTPEHQKLLKITDTAAKKLEKLNLHTPWDVALHLPLRYEDETHIMPIKDAPIGVPCQVEGVVTLQEVQFKPRKQLVVQIQ
DHSGSVLFLRFIHFYPSHQKQMAQGKRIRAVGEIKHGFYGDEMIHPKIRDADNSSLAESLTPVYPTVNGLNQPTLRRIVQ
TALEALPLHDTLPDELLGRLKLPHLAESLRLLHAPPPDYSIRQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRISGQAA
PLHGTGEWSGKLLNALPFSLTQAQQRVLAEIRADMQQTHPMHRLLQGDVGSGKTIVAALAALTAVEAGSQVAVMAPTEIL
AEQHYLKFKQWFEPLGLSVAWLSGSQRKKAKEQNKAALSDGLAPIAVGTHALFQEDVQFHNLGLVIVDEQHRFGVAQRLA
LKNKGQDVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPNRTPIQTRLVNSQRRPEVEGFVLNTCRKGRQVYWVCPLIE
ESETLQLQTATETQAALQAALPELSIGLVHGRMKAAEKAQVMAKFAAGRLNVLVATTVIEVGVDVPNASLMVIEHAERMG
LAQLHQLRGRVGRGAAASTCVLLFAEPLSKLAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEED
LHLLEKAREIAPQLIEEHPDIVEAHLNRWLASRESYLGV

Nucleotide


Download         Length: 2040 bp        

>NTDB_id=1123735 EL276_RS08040 WP_126304942.1 1742225..1744264(+) (recG) [Neisseria animaloris strain NCTC12227]
ATGACACCCGAACACCAAAAGCTGCTCAAAATCACCGACACCGCCGCCAAAAAGCTCGAAAAGCTCAACCTGCACACCCC
GTGGGACGTTGCCCTGCACCTGCCGCTGCGCTACGAAGACGAAACCCACATCATGCCGATTAAAGACGCACCTATCGGCG
TGCCGTGCCAAGTCGAAGGCGTCGTAACCCTGCAAGAAGTGCAGTTCAAACCGCGCAAGCAGCTTGTCGTGCAGATTCAA
GACCACTCCGGCAGCGTGCTGTTTCTGCGCTTCATCCACTTCTACCCCAGCCATCAAAAACAAATGGCGCAAGGCAAACG
CATCCGCGCCGTGGGCGAAATCAAACACGGTTTTTACGGCGACGAAATGATCCACCCCAAAATCCGCGATGCCGACAACA
GCAGCCTTGCCGAAAGCCTTACCCCCGTTTACCCCACCGTAAACGGCCTCAACCAGCCCACCTTACGCCGCATCGTTCAG
ACGGCCTTAGAAGCCCTGCCCCTGCACGACACCCTGCCCGACGAACTCTTAGGCCGTCTGAAACTGCCCCACTTGGCCGA
AAGCCTGCGCCTATTGCACGCCCCGCCGCCCGATTACAGCATCCGCCAACTTTCAGACGGCACCCTCCCCGCATGGCAGC
GGCTCAAATTCGACGAACTGCTCGCCCAACAGCTCTCCATGCGGCTCGCACGGCAAAAACGCATCAGCGGGCAAGCCGCC
CCCCTGCACGGCACCGGCGAATGGTCGGGCAAACTGCTCAACGCCCTGCCCTTTTCCCTCACCCAAGCCCAACAGCGCGT
GCTGGCCGAAATCCGCGCCGACATGCAGCAAACCCACCCCATGCACCGCCTGCTGCAAGGCGACGTAGGCAGCGGCAAAA
CCATCGTTGCCGCCCTGGCCGCCCTCACCGCCGTCGAAGCCGGCAGCCAAGTTGCCGTGATGGCACCCACCGAAATCCTC
GCCGAACAGCACTACCTCAAATTCAAACAATGGTTCGAGCCGCTCGGCCTCAGCGTTGCATGGCTTTCCGGCAGCCAGCG
CAAAAAAGCCAAAGAACAAAACAAAGCCGCCCTTTCAGACGGCCTCGCCCCCATCGCCGTCGGCACCCACGCCCTCTTTC
AAGAAGACGTACAGTTCCACAACCTCGGCCTCGTCATCGTCGACGAACAGCACCGCTTCGGCGTCGCCCAACGCCTCGCC
CTCAAAAACAAAGGGCAAGACGTACACCAGCTCATGATGTCCGCCACACCCATCCCACGCACGCTGGCCATGAGCTTTTT
CGCCGACCTCGACGTTTCCGTGATCGACGAACTGCCGCCCAACCGCACCCCCATCCAAACCCGCCTCGTCAACAGCCAGC
GCCGCCCCGAAGTCGAAGGCTTCGTACTCAACACCTGCCGCAAAGGACGGCAGGTTTACTGGGTCTGCCCTCTCATCGAA
GAAAGCGAAACCCTGCAACTGCAAACCGCCACCGAAACCCAAGCCGCTCTTCAAGCGGCCCTACCCGAACTCAGCATCGG
CCTCGTCCACGGCCGCATGAAAGCCGCCGAAAAAGCCCAAGTGATGGCCAAATTTGCCGCAGGCCGTCTGAACGTACTTG
TTGCCACCACCGTTATCGAAGTCGGCGTAGACGTACCCAACGCCAGCCTCATGGTTATCGAACACGCCGAACGCATGGGC
TTGGCGCAACTGCACCAACTGCGCGGGCGCGTAGGCCGCGGCGCCGCCGCCAGCACCTGCGTCTTACTCTTCGCCGAACC
CCTGAGCAAGCTGGCCAAAGCCCGCCTCAAAGTCATCTACGAACACACCGACGGCTTCGAAATCGCCCGCCAAGACCTCA
ACATCCGCGGCCCCGGCGAATTTCTCGGCGCACGCCAAAGCGGCGTACCCATGCTCCGCTTCGCCAACCTCGAAGAAGAC
CTGCACCTTTTAGAAAAAGCCCGCGAAATCGCCCCCCAACTGATCGAAGAGCACCCCGACATCGTCGAAGCCCACCTCAA
CCGCTGGCTGGCGAGCAGGGAAAGTTATTTGGGGGTTTGA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(263-418)

RecG wedge domain (RecG_wedge)

(12-164)

Helicase conserved C-terminal domain (Helicase_C)

(467-574)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(603-665)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A448UD89

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

82.622

100

0.826

Multiple sequence alignment