Detailed information
Bioinformatically predicted
Overview
| Name | pilK | Type | Machinery gene |
| Locus tag | EL276_RS03390 | Genome accession | NZ_LR134516 |
| Coordinates | 763338..763898 (+) | Length | 186 a.a. |
| NCBI ID | WP_107879254.1 | Uniprot ID | A0A3S4YA20 |
| Organism | Neisseria animaloris strain NCTC12227 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 758338..768898
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL276_RS03365 (NCTC12227_00688) | - | 758562..759143 (-) | 582 | WP_126304262.1 | superoxide dismutase | - |
| EL276_RS03370 (NCTC12227_00689) | dnaB | 759354..760763 (+) | 1410 | WP_085390483.1 | replicative DNA helicase | - |
| EL276_RS03375 (NCTC12227_00690) | pilH | 760923..761612 (+) | 690 | WP_107879255.1 | GspH/FimT family pseudopilin | Machinery gene |
| EL276_RS03380 (NCTC12227_00691) | pilV | 761642..762367 (+) | 726 | WP_172594887.1 | type IV pilus modification protein PilV | - |
| EL276_RS03385 (NCTC12227_00692) | - | 762370..763359 (+) | 990 | WP_085390487.1 | PilW family protein | - |
| EL276_RS03390 (NCTC12227_00693) | pilK | 763338..763898 (+) | 561 | WP_107879254.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| EL276_RS03395 (NCTC12227_00694) | - | 763911..764381 (+) | 471 | WP_107879253.1 | PilX family type IV pilin | - |
| EL276_RS03400 (NCTC12227_00695) | - | 764632..765315 (+) | 684 | WP_126304263.1 | SIR2 family NAD-dependent protein deacylase | - |
| EL276_RS03405 (NCTC12227_00696) | ygiD | 765341..766138 (-) | 798 | WP_126304264.1 | 4,5-DOPA dioxygenase extradiol | - |
| EL276_RS03410 (NCTC12227_00697) | - | 766392..766802 (-) | 411 | WP_085390497.1 | DoxX family protein | - |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 20337.17 Da Isoelectric Point: 9.6026
>NTDB_id=1123722 EL276_RS03390 WP_107879254.1 763338..763898(+) (pilK) [Neisseria animaloris strain NCTC12227]
MRKSYILRHNLKAAQQGFSLFIVLIVMLVIAFLVVSATQSYNTEQRISTNDADRKFALSLAEAALQVGEAEILNFKDSQV
VFSTDCSNGLCAAAGSEVSTTPRRVVQAGGDTPAWKRKKECGGSLCIDTNGKIYNVGSSRGRRNARYIVEYVGTQPDGSP
IYRVTSKAWGKNNNTVVMLQSYISVE
MRKSYILRHNLKAAQQGFSLFIVLIVMLVIAFLVVSATQSYNTEQRISTNDADRKFALSLAEAALQVGEAEILNFKDSQV
VFSTDCSNGLCAAAGSEVSTTPRRVVQAGGDTPAWKRKKECGGSLCIDTNGKIYNVGSSRGRRNARYIVEYVGTQPDGSP
IYRVTSKAWGKNNNTVVMLQSYISVE
Nucleotide
Download Length: 561 bp
>NTDB_id=1123722 EL276_RS03390 WP_107879254.1 763338..763898(+) (pilK) [Neisseria animaloris strain NCTC12227]
ATGCGCAAATCGTACATTTTAAGACATAATTTGAAAGCCGCACAGCAAGGATTTTCACTGTTTATTGTATTAATAGTAAT
GCTTGTTATTGCATTTTTGGTTGTGTCGGCTACCCAATCTTATAACACTGAGCAACGTATCAGTACTAATGATGCAGATA
GAAAATTTGCTTTATCTTTGGCTGAGGCGGCCTTACAAGTAGGGGAAGCAGAGATTTTAAATTTCAAAGATTCTCAGGTT
GTTTTTTCAACTGATTGTAGTAATGGTTTATGTGCTGCTGCAGGTTCTGAAGTATCTACAACTCCACGGAGGGTTGTGCA
GGCAGGTGGTGATACTCCGGCGTGGAAAAGAAAAAAGGAATGCGGAGGCTCTTTGTGTATTGATACGAATGGTAAGATTT
ATAATGTAGGATCTTCAAGAGGTAGACGTAACGCCAGATATATCGTGGAATATGTTGGTACGCAGCCGGATGGTTCCCCT
ATTTACCGAGTTACTTCAAAAGCATGGGGCAAAAATAATAATACGGTTGTTATGTTGCAGTCTTATATATCTGTCGAGTA
A
ATGCGCAAATCGTACATTTTAAGACATAATTTGAAAGCCGCACAGCAAGGATTTTCACTGTTTATTGTATTAATAGTAAT
GCTTGTTATTGCATTTTTGGTTGTGTCGGCTACCCAATCTTATAACACTGAGCAACGTATCAGTACTAATGATGCAGATA
GAAAATTTGCTTTATCTTTGGCTGAGGCGGCCTTACAAGTAGGGGAAGCAGAGATTTTAAATTTCAAAGATTCTCAGGTT
GTTTTTTCAACTGATTGTAGTAATGGTTTATGTGCTGCTGCAGGTTCTGAAGTATCTACAACTCCACGGAGGGTTGTGCA
GGCAGGTGGTGATACTCCGGCGTGGAAAAGAAAAAAGGAATGCGGAGGCTCTTTGTGTATTGATACGAATGGTAAGATTT
ATAATGTAGGATCTTCAAGAGGTAGACGTAACGCCAGATATATCGTGGAATATGTTGGTACGCAGCCGGATGGTTCCCCT
ATTTACCGAGTTACTTCAAAAGCATGGGGCAAAAATAATAATACGGTTGTTATGTTGCAGTCTTATATATCTGTCGAGTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilK | Neisseria gonorrhoeae MS11 |
49.462 |
100 |
0.495 |