Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | EL243_RS05320 | Genome accession | NZ_LR134511 |
| Coordinates | 1010539..1010841 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni strain NCTC10983 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1005539..1015841
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL243_RS05295 (NCTC10983_01066) | rpsR | 1005901..1006161 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| EL243_RS05300 (NCTC10983_01067) | lon | 1006222..1008597 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| EL243_RS05305 (NCTC10983_01068) | - | 1008614..1009261 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| EL243_RS05310 (NCTC10983_01069) | fliW | 1009422..1009811 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| EL243_RS05315 (NCTC10983_01070) | proC | 1009811..1010542 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| EL243_RS05320 (NCTC10983_01071) | ctsT | 1010539..1010841 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| EL243_RS05325 (NCTC10983_01072) | - | 1010838..1011500 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| EL243_RS05330 (NCTC10983_01073) | - | 1011497..1011949 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| EL243_RS05335 (NCTC10983_01074) | hemD | 1011946..1012575 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| EL243_RS05340 (NCTC10983_01075) | thiE | 1012553..1013185 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| EL243_RS05345 (NCTC10983_01076) | thiD | 1013175..1013987 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EL243_RS05350 (NCTC10983_01077) | - | 1013984..1014670 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| EL243_RS05355 (NCTC10983_01078) | - | 1014667..1015428 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1123582 EL243_RS05320 WP_002853046.1 1010539..1010841(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain NCTC10983]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1123582 EL243_RS05320 WP_002853046.1 1010539..1010841(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain NCTC10983]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |