Detailed information NTG1123514

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: EL238_RS05550
• Genome accession: NZ_LR134507
• Coordinates: 1081244..1082194 (+)
• Length: 316 a.a.
• NCBI ID: WP_053869672.1
• Uniprot ID: A0AAN2YWK7
• Organism: Campylobacter jejuni strain NCTC12851
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1076244..1087194

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL238_RS05525 (NCTC12851_01122)	-	1076593..1077615 (-)	1023	WP_002876190.1	hypothetical protein	-
EL238_RS05530 (NCTC12851_01123)	-	1077686..1078459 (+)	774	WP_002866160.1	glycosyltransferase family 25 protein	-
EL238_RS05535 (NCTC12851_01124)	wlaTB	1078452..1079408 (+)	957	WP_002860237.1	class E lipooligosaccharide biosynthesis protein WlaTB	-
EL238_RS05540 (NCTC12851_01125)	wlaTC	1079405..1080364 (+)	960	WP_002860238.1	class E lipooligosaccharide biosynthesis protein WlaTC	-
EL238_RS05545 (NCTC12851_01126)	-	1080367..1081185 (-)	819	WP_002876193.1	glycosyltransferase family 2 protein	-
EL238_RS05550 (NCTC12851_01127)	waaF	1081244..1082194 (+)	951	WP_053869672.1	lipopolysaccharide heptosyltransferase II	Regulator
EL238_RS05555 (NCTC12851_01128)	-	1082246..1083745 (+)	1500	WP_002877116.1	MBOAT family O-acyltransferase	-
EL238_RS05560 (NCTC12851_01129)	-	1083893..1084870 (+)	978	WP_002866168.1	hypothetical protein	-
EL238_RS05565 (NCTC12851_01130)	gmhA	1084874..1085434 (-)	561	WP_002842583.1	D-sedoheptulose 7-phosphate isomerase	-
EL238_RS05570 (NCTC12851_01131)	rfaE1	1085431..1086816 (-)	1386	WP_126393797.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36215.73 Da
• Isoelectric Point: 10.2575

>NTDB_id=1123514 EL238_RS05550 WP_053869672.1 1081244..1082194(+) (waaF) [Campylobacter jejuni strain NCTC12851]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHSKDLKLPFKLKLQDPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKSEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISTVYKIKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEEIKKLSTP

Nucleotide

• Length: 951 bp

>NTDB_id=1123514 EL238_RS05550 WP_053869672.1 1081244..1082194(+) (waaF) [Campylobacter jejuni strain NCTC12851]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTCTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAACTTCAAGACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAATCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAATCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAACAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTACGGTTTATAAGATAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGTCCTTTAAAGC
ACCATAAATGCATGAAAGATCTAAAGCCTGAAAAGGTGATAGAAGAAATTAAAAAATTAAGCACTCCATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	93.61	99.051	0.927