Detailed information NTG1123483

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: EL229_RS05645
• Genome accession: NZ_LR134505
• Coordinates: 1084825..1085784 (+)
• Length: 319 a.a.
• NCBI ID: WP_002871702.1
• Uniprot ID: A0A5T0XJ57
• Organism: Campylobacter jejuni subsp. jejuni strain NCTC12109
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1079825..1090784

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL229_RS05620 (NCTC12109_01137)	neuC	1080416..1081540 (+)	1125	WP_025399082.1	UDP-N-acetylglucosamine 2-epimerase	-
EL229_RS05625 (NCTC12109_01138)	-	1081533..1082411 (+)	879	WP_172592521.1	glycosyltransferase	-
EL229_RS05630 (NCTC12109_01139)	-	1082476..1083141 (+)	666	WP_002869017.1	acylneuraminate cytidylyltransferase family protein	-
EL229_RS05635 (NCTC12109_01140)	-	1083129..1083962 (+)	834	WP_126320748.1	CatB-related O-acetyltransferase	-
EL229_RS05640 (NCTC12109_01141)	waaV	1083954..1084766 (-)	813	WP_057980860.1	glycosyltransferase family 2 protein	-
EL229_RS05645 (NCTC12109_01142)	waaF	1084825..1085784 (+)	960	WP_002871702.1	lipopolysaccharide heptosyltransferase II	Regulator
EL229_RS05650 (NCTC12109_01143)	gmhA	1085765..1086325 (-)	561	WP_126320749.1	D-sedoheptulose 7-phosphate isomerase	-
EL229_RS05655 (NCTC12109_01144)	rfaE1	1086322..1087707 (-)	1386	WP_002896702.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
EL229_RS05660 (NCTC12109_01145)	rfaD	1087700..1088653 (-)	954	WP_002871699.1	ADP-glyceromanno-heptose 6-epimerase	-
EL229_RS05665 (NCTC12109_01146)	gmhB	1088654..1089215 (-)	562	Protein_1085	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
EL229_RS05670 (NCTC12109_01147)	-	1089296..1089598 (+)	303	WP_002852762.1	cytochrome c	-
EL229_RS05675 (NCTC12109_01148)	ccoS	1089621..1089827 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36703.22 Da
• Isoelectric Point: 10.3737

>NTDB_id=1123483 EL229_RS05645 WP_002871702.1 1084825..1085784(+) (waaF) [Campylobacter jejuni subsp. jejuni strain NCTC12109]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFT
FRSAFSSKIILHILKTRQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGSTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=1123483 EL229_RS05645 WP_002871702.1 1084825..1085784(+) (waaF) [Campylobacter jejuni subsp. jejuni strain NCTC12109]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGGTAAAATCGATCTTAGCTTTACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAGACAAAGATATTTTTTTGACAAAAATAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCTCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (97-294)

3D structure

• AlphaFold DB: A0A5T0XJ57

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.357	100	0.944