Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | EL229_RS05300 | Genome accession | NZ_LR134505 |
| Coordinates | 1015733..1016035 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni strain NCTC12109 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1010733..1021035
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL229_RS05275 (NCTC12109_01068) | rpsR | 1011095..1011355 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| EL229_RS05280 (NCTC12109_01069) | lon | 1011416..1013791 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| EL229_RS05285 (NCTC12109_01070) | - | 1013808..1014455 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| EL229_RS05290 (NCTC12109_01071) | fliW | 1014616..1015005 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| EL229_RS05295 (NCTC12109_01072) | proC | 1015005..1015736 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| EL229_RS05300 (NCTC12109_01073) | ctsT | 1015733..1016035 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| EL229_RS05305 (NCTC12109_01074) | - | 1016032..1016694 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| EL229_RS05310 (NCTC12109_01075) | - | 1016691..1017143 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| EL229_RS05315 (NCTC12109_01076) | hemD | 1017140..1017769 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| EL229_RS05320 (NCTC12109_01077) | thiE | 1017747..1018379 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| EL229_RS05325 (NCTC12109_01078) | thiD | 1018369..1019181 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EL229_RS05330 (NCTC12109_01079) | - | 1019178..1019864 (-) | 687 | WP_002868632.1 | endonuclease III domain-containing protein | - |
| EL229_RS05335 (NCTC12109_01080) | - | 1019861..1020622 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1123481 EL229_RS05300 WP_002853046.1 1015733..1016035(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain NCTC12109]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1123481 EL229_RS05300 WP_002853046.1 1015733..1016035(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain NCTC12109]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |