Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | EL236_RS05190 | Genome accession | NZ_LR134502 |
| Coordinates | 1010263..1010565 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain NCTC13257 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1005263..1015565
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL236_RS05165 (NCTC13257_01039) | rpsR | 1005625..1005885 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| EL236_RS05170 (NCTC13257_01040) | lon | 1005946..1008321 (-) | 2376 | WP_052861434.1 | endopeptidase La | - |
| EL236_RS05175 (NCTC13257_01041) | - | 1008338..1008985 (-) | 648 | WP_012006727.1 | outer membrane protein assembly factor BamD | - |
| EL236_RS05180 (NCTC13257_01042) | fliW | 1009146..1009535 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| EL236_RS05185 (NCTC13257_01043) | proC | 1009535..1010266 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| EL236_RS05190 (NCTC13257_01044) | ctsT | 1010263..1010565 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| EL236_RS05195 (NCTC13257_01045) | - | 1010562..1011224 (+) | 663 | WP_052861432.1 | hypothetical protein | - |
| EL236_RS05200 (NCTC13257_01046) | - | 1011221..1011673 (+) | 453 | WP_002877757.1 | hypothetical protein | - |
| EL236_RS05205 (NCTC13257_01047) | hemD | 1011670..1012299 (-) | 630 | WP_002877758.1 | uroporphyrinogen-III synthase | - |
| EL236_RS05210 (NCTC13257_01048) | thiE | 1012277..1012909 (-) | 633 | WP_002877759.1 | thiamine phosphate synthase | - |
| EL236_RS05215 (NCTC13257_01049) | thiD | 1012899..1013711 (-) | 813 | WP_002877760.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EL236_RS05220 (NCTC13257_01050) | - | 1013708..1014394 (-) | 687 | WP_002866108.1 | endonuclease III domain-containing protein | - |
| EL236_RS05225 (NCTC13257_01051) | - | 1014391..1015152 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1123434 EL236_RS05190 WP_002853046.1 1010263..1010565(+) (ctsT) [Campylobacter jejuni strain NCTC13257]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1123434 EL236_RS05190 WP_002853046.1 1010263..1010565(+) (ctsT) [Campylobacter jejuni strain NCTC13257]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |