Detailed information
Bioinformatically predicted
Overview
| Name | ctsF | Type | Machinery gene |
| Locus tag | EL222_RS07435 | Genome accession | NZ_LR134500 |
| Coordinates | 1429105..1430286 (-) | Length | 393 a.a. |
| NCBI ID | WP_002894094.1 | Uniprot ID | A0A1J6L696 |
| Organism | Campylobacter jejuni strain NCTC13261 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1424105..1435286
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL222_RS07405 (NCTC13261_01506) | - | 1424650..1424991 (+) | 342 | WP_126596778.1 | hypothetical protein | - |
| EL222_RS07410 (NCTC13261_01507) | flgM | 1425054..1425251 (+) | 198 | WP_002855791.1 | flagellar biosynthesis anti-sigma factor FlgM | - |
| EL222_RS07415 (NCTC13261_01508) | - | 1425293..1425727 (+) | 435 | WP_002779263.1 | flagellar protein FlgN | - |
| EL222_RS07420 (NCTC13261_01509) | flgK | 1425737..1427563 (+) | 1827 | WP_002894098.1 | flagellar hook-associated protein FlgK | - |
| EL222_RS07425 (NCTC13261_01510) | - | 1427580..1428344 (+) | 765 | WP_002894096.1 | TIGR02757 family protein | - |
| EL222_RS07430 (NCTC13261_01511) | - | 1428348..1429112 (+) | 765 | WP_002855821.1 | TSUP family transporter | - |
| EL222_RS07435 (NCTC13261_01512) | ctsF | 1429105..1430286 (-) | 1182 | WP_002894094.1 | type II secretion system F family protein | Machinery gene |
| EL222_RS07440 (NCTC13261_01513) | ctsE | 1430283..1431842 (-) | 1560 | WP_021137528.1 | GspE/PulE family protein | Machinery gene |
| EL222_RS07445 (NCTC13261_01514) | ctsX | 1431832..1432419 (-) | 588 | WP_002851370.1 | membrane protein | Machinery gene |
| EL222_RS07450 (NCTC13261_01515) | ctsP | 1432423..1433031 (-) | 609 | WP_002851464.1 | ATP-binding protein | Machinery gene |
| EL222_RS07455 (NCTC13261_01516) | ctsD | 1433024..1434436 (-) | 1413 | WP_002856543.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| EL222_RS07460 (NCTC13261_01517) | ctsR | 1434414..1434725 (-) | 312 | WP_002855438.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 393 a.a. Molecular weight: 45736.38 Da Isoelectric Point: 9.2540
>NTDB_id=1123411 EL222_RS07435 WP_002894094.1 1429105..1430286(-) (ctsF) [Campylobacter jejuni strain NCTC13261]
MKFYEVEFLKNNQNYTKTIKAENLNIAQTKALSKNWKIIDIKEIQKSNFQRLKDENFILFFKELALLCEVGLSVQEAIKE
LYLMHSCKIMKKILDNLILAQNLNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDSYGIFCIFLFVVFIVMLILAYKNFHSFAFSCDF
LFLKIPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSL
VFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLVFLEPMMTLFVAFLVLFLALGIFLPMWELSSGVNFN
MKFYEVEFLKNNQNYTKTIKAENLNIAQTKALSKNWKIIDIKEIQKSNFQRLKDENFILFFKELALLCEVGLSVQEAIKE
LYLMHSCKIMKKILDNLILAQNLNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDSYGIFCIFLFVVFIVMLILAYKNFHSFAFSCDF
LFLKIPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSL
VFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLVFLEPMMTLFVAFLVLFLALGIFLPMWELSSGVNFN
Nucleotide
Download Length: 1182 bp
>NTDB_id=1123411 EL222_RS07435 WP_002894094.1 1429105..1430286(-) (ctsF) [Campylobacter jejuni strain NCTC13261]
ATGAAATTTTATGAAGTAGAATTTCTTAAAAACAATCAAAATTATACAAAAACTATAAAAGCTGAAAATTTAAATATAGC
ACAAACAAAAGCCTTATCAAAGAATTGGAAAATCATTGATATAAAAGAAATTCAAAAATCTAATTTTCAGAGATTAAAGG
ATGAAAATTTCATACTCTTTTTTAAAGAGCTGGCTTTATTGTGTGAAGTTGGATTAAGTGTTCAAGAAGCGATTAAAGAA
TTATATCTTATGCATTCTTGCAAGATTATGAAAAAAATATTAGACAATTTAATTTTAGCCCAAAATCTAAATCAAGCTTT
TGAAAATGCTAATTTTGGATTAAATCGTGCGGAGCTAGCTTTGATAAAAACGGCTGAAAAGACAGGAAAAATCAGTGAAG
TGTTTAGTCAAATTTCTAAACTTCGAGAAAAAAGCTTAGAGAGTCAAAAACAATTGAAAAAGGCTTTTAGATATCCTACT
TTGGTTTTTTTAAGTATTATCGGAGCATTTTTGTTTTTAATGCTTTTTGTAGTGCCTAATTTTAAAGATTTATTTGAAAA
TTTAGGCGCGAGTTTGCCTTTTATCACGCATGTAATGTTAGAAATTTATAATTTTTTAGATAGCTATGGAATTTTTTGCA
TATTTTTGTTTGTTGTTTTTATTGTTATGCTTATTTTAGCTTATAAAAATTTTCATTCTTTTGCTTTTTCTTGCGATTTT
TTATTTTTAAAAATACCTTTGATTTCTCGTTTGATTATTTATAATCAAAATTATTATTTTTTTATGGTTTTTTCTTTGCT
TTTAAAAAATGGAATTTCAATATCTAAAGCTTTTGATTTAGCTATTATAGGGCTTGAAAATAAATTTTTAATTTTTCAGT
ATAAAAAACTTTTTAGTTTTATAGATTCTGGTCTTGAGTTAAGTCAGGCTTTTAAAAAGATTGATATTTTTGATTCTTTG
GTATTTTCTATGCTCAGTGTTGCGATGAAAAGTGGAAGACTTGAAGTGTTAAGTGAAGAAATTGCCAAATATTATCAACA
AAAAAGTGAAAATTTAATGGATAGATTTTTGGTTTTTTTAGAGCCTATGATGACTTTATTTGTGGCGTTTTTAGTTTTGT
TTTTGGCTTTAGGTATATTTTTACCTATGTGGGAGCTTAGCTCAGGGGTCAATTTTAACTAA
ATGAAATTTTATGAAGTAGAATTTCTTAAAAACAATCAAAATTATACAAAAACTATAAAAGCTGAAAATTTAAATATAGC
ACAAACAAAAGCCTTATCAAAGAATTGGAAAATCATTGATATAAAAGAAATTCAAAAATCTAATTTTCAGAGATTAAAGG
ATGAAAATTTCATACTCTTTTTTAAAGAGCTGGCTTTATTGTGTGAAGTTGGATTAAGTGTTCAAGAAGCGATTAAAGAA
TTATATCTTATGCATTCTTGCAAGATTATGAAAAAAATATTAGACAATTTAATTTTAGCCCAAAATCTAAATCAAGCTTT
TGAAAATGCTAATTTTGGATTAAATCGTGCGGAGCTAGCTTTGATAAAAACGGCTGAAAAGACAGGAAAAATCAGTGAAG
TGTTTAGTCAAATTTCTAAACTTCGAGAAAAAAGCTTAGAGAGTCAAAAACAATTGAAAAAGGCTTTTAGATATCCTACT
TTGGTTTTTTTAAGTATTATCGGAGCATTTTTGTTTTTAATGCTTTTTGTAGTGCCTAATTTTAAAGATTTATTTGAAAA
TTTAGGCGCGAGTTTGCCTTTTATCACGCATGTAATGTTAGAAATTTATAATTTTTTAGATAGCTATGGAATTTTTTGCA
TATTTTTGTTTGTTGTTTTTATTGTTATGCTTATTTTAGCTTATAAAAATTTTCATTCTTTTGCTTTTTCTTGCGATTTT
TTATTTTTAAAAATACCTTTGATTTCTCGTTTGATTATTTATAATCAAAATTATTATTTTTTTATGGTTTTTTCTTTGCT
TTTAAAAAATGGAATTTCAATATCTAAAGCTTTTGATTTAGCTATTATAGGGCTTGAAAATAAATTTTTAATTTTTCAGT
ATAAAAAACTTTTTAGTTTTATAGATTCTGGTCTTGAGTTAAGTCAGGCTTTTAAAAAGATTGATATTTTTGATTCTTTG
GTATTTTCTATGCTCAGTGTTGCGATGAAAAGTGGAAGACTTGAAGTGTTAAGTGAAGAAATTGCCAAATATTATCAACA
AAAAAGTGAAAATTTAATGGATAGATTTTTGGTTTTTTTAGAGCCTATGATGACTTTATTTGTGGCGTTTTTAGTTTTGT
TTTTGGCTTTAGGTATATTTTTACCTATGTGGGAGCTTAGCTCAGGGGTCAATTTTAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsF | Campylobacter jejuni subsp. jejuni 81-176 |
97.959 |
99.746 |
0.977 |