Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | EL222_RS05580 | Genome accession | NZ_LR134500 |
| Coordinates | 1051917..1052219 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain NCTC13261 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1046917..1057219
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL222_RS05555 (NCTC13261_01127) | rpsR | 1047279..1047539 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| EL222_RS05560 (NCTC13261_01128) | lon | 1047600..1049975 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| EL222_RS05565 (NCTC13261_01129) | - | 1049992..1050639 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| EL222_RS05570 (NCTC13261_01130) | fliW | 1050800..1051189 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| EL222_RS05575 (NCTC13261_01131) | proC | 1051189..1051920 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| EL222_RS05580 (NCTC13261_01132) | ctsT | 1051917..1052219 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| EL222_RS05585 (NCTC13261_01133) | - | 1052216..1052878 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| EL222_RS05590 (NCTC13261_01134) | - | 1052875..1053327 (+) | 453 | WP_002894305.1 | hypothetical protein | - |
| EL222_RS05595 (NCTC13261_01135) | hemD | 1053324..1053953 (-) | 630 | WP_002864257.1 | uroporphyrinogen-III synthase | - |
| EL222_RS05600 (NCTC13261_01136) | thiE | 1053931..1054563 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| EL222_RS05605 (NCTC13261_01137) | thiD | 1054553..1055365 (-) | 813 | WP_038816455.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EL222_RS05610 (NCTC13261_01138) | - | 1055362..1056048 (-) | 687 | WP_002894310.1 | endonuclease III domain-containing protein | - |
| EL222_RS05615 (NCTC13261_01139) | - | 1056045..1056806 (-) | 762 | WP_002894311.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1123401 EL222_RS05580 WP_002853046.1 1051917..1052219(+) (ctsT) [Campylobacter jejuni strain NCTC13261]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1123401 EL222_RS05580 WP_002853046.1 1051917..1052219(+) (ctsT) [Campylobacter jejuni strain NCTC13261]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |