Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   EL227_RS06800 Genome accession   NZ_LR134499
Coordinates   1309309..1310277 (+) Length   322 a.a.
NCBI ID   WP_002893972.1    Uniprot ID   A0A3H8JWJ4
Organism   Campylobacter jejuni strain NCTC13255     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1304309..1315277
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL227_RS06775 (NCTC13255_01357) cdsA 1305216..1305941 (-) 726 WP_002856027.1 phosphatidate cytidylyltransferase -
  EL227_RS06780 (NCTC13255_01358) - 1305950..1306288 (-) 339 WP_002855905.1 hypothetical protein -
  EL227_RS06785 (NCTC13255_01359) - 1306290..1307597 (-) 1308 WP_002856257.1 NFACT family protein -
  EL227_RS06790 (NCTC13255_01360) mobA 1307659..1308234 (+) 576 WP_002855734.1 molybdenum cofactor guanylyltransferase -
  EL227_RS06795 (NCTC13255_01361) pldA 1308231..1309220 (+) 990 WP_002855844.1 phospholipase A -
  EL227_RS06800 (NCTC13255_01362) ceuB 1309309..1310277 (+) 969 WP_002893972.1 ABC transporter permease Machinery gene
  EL227_RS06805 (NCTC13255_01363) ceuC 1310270..1311208 (+) 939 WP_002856142.1 iron chelate uptake ABC transporter family permease subunit -
  EL227_RS06810 (NCTC13255_01364) ceuD 1311205..1311960 (+) 756 WP_052802648.1 ABC transporter ATP-binding protein -
  EL227_RS06815 (NCTC13255_01365) ceuB 1311973..1312965 (+) 993 WP_002856494.1 enterochelin ABC transporter substrate-binding protein CeuB -
  EL227_RS06820 (NCTC13255_01366) - 1313120..1313341 (+) 222 WP_002856036.1 hypothetical protein -
  EL227_RS06825 (NCTC13255_01367) - 1313342..1313623 (+) 282 WP_002856297.1 type II toxin-antitoxin system RelE/ParE family toxin -
  EL227_RS06835 (NCTC13255_01369) - 1313983..1314537 (-) 555 WP_002855904.1 membrane protein -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 35425.35 Da        Isoelectric Point: 9.6678

>NTDB_id=1123380 EL227_RS06800 WP_002893972.1 1309309..1310277(+) (ceuB) [Campylobacter jejuni strain NCTC13255]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=1123380 EL227_RS06800 WP_002893972.1 1309309..1310277(+) (ceuB) [Campylobacter jejuni strain NCTC13255]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACGGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGGACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACCCAAGCTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACTACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGTTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTTTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGTTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains


Predicted by InterproScan.

(15-317)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3H8JWJ4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.689

100

0.997


Multiple sequence alignment