Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | EL227_RS05535 | Genome accession | NZ_LR134499 |
| Coordinates | 1055404..1055706 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain NCTC13255 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1050404..1060706
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL227_RS05510 (NCTC13255_01104) | rpsR | 1050766..1051026 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| EL227_RS05515 (NCTC13255_01105) | lon | 1051087..1053462 (-) | 2376 | WP_002856101.1 | endopeptidase La | - |
| EL227_RS05520 (NCTC13255_01106) | - | 1053479..1054126 (-) | 648 | WP_052802621.1 | outer membrane protein assembly factor BamD | - |
| EL227_RS05525 (NCTC13255_01107) | fliW | 1054287..1054676 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| EL227_RS05530 (NCTC13255_01108) | proC | 1054676..1055407 (+) | 732 | WP_002855729.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| EL227_RS05535 (NCTC13255_01109) | ctsT | 1055404..1055706 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| EL227_RS05540 (NCTC13255_01110) | - | 1055703..1056365 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| EL227_RS05545 (NCTC13255_01111) | - | 1056362..1056814 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| EL227_RS05550 (NCTC13255_01112) | hemD | 1056811..1057440 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| EL227_RS05555 (NCTC13255_01113) | thiE | 1057418..1058050 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| EL227_RS05560 (NCTC13255_01114) | thiD | 1058040..1058852 (-) | 813 | WP_002856188.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EL227_RS05565 (NCTC13255_01115) | - | 1058849..1059535 (-) | 687 | WP_052802622.1 | endonuclease III domain-containing protein | - |
| EL227_RS05570 (NCTC13255_01116) | - | 1059532..1060293 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=1123373 EL227_RS05535 WP_002855822.1 1055404..1055706(+) (ctsT) [Campylobacter jejuni strain NCTC13255]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1123373 EL227_RS05535 WP_002855822.1 1055404..1055706(+) (ctsT) [Campylobacter jejuni strain NCTC13255]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |