Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | EL232_RS07465 | Genome accession | NZ_LR134498 |
| Coordinates | 1381699..1382001 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain NCTC13265 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1376699..1387001
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL232_RS07430 (NCTC13265_01503) | - | 1377112..1377873 (+) | 762 | WP_002852748.1 | ATP-binding protein | - |
| EL232_RS07435 (NCTC13265_01504) | - | 1377870..1378556 (+) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| EL232_RS07440 (NCTC13265_01505) | thiD | 1378553..1379365 (+) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EL232_RS07445 (NCTC13265_01506) | thiE | 1379355..1379987 (+) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| EL232_RS07450 (NCTC13265_01507) | hemD | 1379965..1380594 (+) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| EL232_RS07455 (NCTC13265_01508) | - | 1380591..1381043 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| EL232_RS07460 (NCTC13265_01509) | - | 1381040..1381702 (-) | 663 | WP_002858296.1 | hypothetical protein | - |
| EL232_RS07465 (NCTC13265_01510) | ctsT | 1381699..1382001 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| EL232_RS07470 (NCTC13265_01511) | proC | 1381998..1382729 (-) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| EL232_RS07475 (NCTC13265_01512) | fliW | 1382729..1383118 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| EL232_RS07480 (NCTC13265_01513) | - | 1383277..1383924 (+) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| EL232_RS07485 (NCTC13265_01514) | lon | 1383941..1386316 (+) | 2376 | WP_002852988.1 | endopeptidase La | - |
| EL232_RS07490 (NCTC13265_01515) | rpsR | 1386376..1386636 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1123358 EL232_RS07465 WP_002853046.1 1381699..1382001(-) (ctsT) [Campylobacter jejuni strain NCTC13265]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1123358 EL232_RS07465 WP_002853046.1 1381699..1382001(-) (ctsT) [Campylobacter jejuni strain NCTC13265]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |