Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   EL232_RS06165 Genome accession   NZ_LR134498
Coordinates   1119556..1120524 (-) Length   322 a.a.
NCBI ID   WP_002867310.1    Uniprot ID   A0AAW5EG90
Organism   Campylobacter jejuni strain NCTC13265     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1114556..1125524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL232_RS06140 (NCTC13265_01241) - 1116088..1116642 (+) 555 WP_002854110.1 membrane protein -
  EL232_RS06150 (NCTC13265_01243) ceuB 1116868..1117860 (-) 993 WP_002938643.1 enterochelin ABC transporter substrate-binding protein CeuB -
  EL232_RS06155 (NCTC13265_01244) ceuD 1117873..1118628 (-) 756 WP_002873631.1 ABC transporter ATP-binding protein -
  EL232_RS06160 (NCTC13265_01245) ceuC 1118625..1119563 (-) 939 WP_002867309.1 iron chelate uptake ABC transporter family permease subunit -
  EL232_RS06165 (NCTC13265_01246) ceuB 1119556..1120524 (-) 969 WP_002867310.1 ABC transporter permease Machinery gene
  EL232_RS06170 (NCTC13265_01247) pldA 1120610..1121599 (-) 990 WP_002867311.1 phospholipase A -
  EL232_RS06175 (NCTC13265_01248) mobA 1121596..1122171 (-) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  EL232_RS06180 (NCTC13265_01249) - 1122233..1123540 (+) 1308 WP_002914001.1 NFACT family protein -
  EL232_RS06185 (NCTC13265_01250) - 1123542..1123880 (+) 339 WP_002852397.1 hypothetical protein -
  EL232_RS06190 (NCTC13265_01251) cdsA 1123889..1124614 (+) 726 WP_002867314.1 phosphatidate cytidylyltransferase -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35437.40 Da        Isoelectric Point: 9.6678

>NTDB_id=1123352 EL232_RS06165 WP_002867310.1 1119556..1120524(-) (ceuB) [Campylobacter jejuni strain NCTC13265]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFIQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIIARLVIFPFEMPLSITTGVLGSLIFIFLLLKRKA
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=1123352 EL232_RS06165 WP_002867310.1 1119556..1120524(-) (ceuB) [Campylobacter jejuni strain NCTC13265]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATCCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTTACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCATC
TTTTTTCATTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
ACTTTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCACAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTGCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

98.758

100

0.988

Multiple sequence alignment