Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   EL228_RS07320 Genome accession   NZ_LR134497
Coordinates   1420646..1421614 (+) Length   322 a.a.
NCBI ID   WP_002882700.1    Uniprot ID   A0A690GGM2
Organism   Campylobacter jejuni strain NCTC13268     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1415646..1426614
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL228_RS07295 (NCTC13268_01517) cdsA 1416555..1417280 (-) 726 WP_126623845.1 phosphatidate cytidylyltransferase -
  EL228_RS07300 (NCTC13268_01518) - 1417289..1417627 (-) 339 WP_002852397.1 hypothetical protein -
  EL228_RS07305 (NCTC13268_01519) - 1417629..1418936 (-) 1308 WP_002853936.1 NFACT family protein -
  EL228_RS07310 (NCTC13268_01520) mobA 1418999..1419574 (+) 576 WP_002905935.1 molybdenum cofactor guanylyltransferase -
  EL228_RS07315 (NCTC13268_01521) pldA 1419571..1420560 (+) 990 WP_100620510.1 phospholipase A -
  EL228_RS07320 (NCTC13268_01522) ceuB 1420646..1421614 (+) 969 WP_002882700.1 ABC transporter permease Machinery gene
  EL228_RS07325 (NCTC13268_01523) ceuC 1421607..1422545 (+) 939 WP_070306845.1 iron chelate uptake ABC transporter family permease subunit -
  EL228_RS07330 (NCTC13268_01524) ceuD 1422542..1423297 (+) 756 WP_002858409.1 ABC transporter ATP-binding protein -
  EL228_RS07335 (NCTC13268_01525) ceuB 1423310..1424302 (+) 993 WP_038816949.1 enterochelin ABC transporter substrate-binding protein CeuB -
  EL228_RS07345 (NCTC13268_01527) - 1424528..1425082 (-) 555 WP_002882696.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35441.35 Da        Isoelectric Point: 9.6678

>NTDB_id=1123323 EL228_RS07320 WP_002882700.1 1420646..1421614(+) (ceuB) [Campylobacter jejuni strain NCTC13268]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKA
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=1123323 EL228_RS07320 WP_002882700.1 1420646..1421614(+) (ceuB) [Campylobacter jejuni strain NCTC13268]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATCCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTTACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCATC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
ACTTTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCACAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A690GGM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.379

100

0.994

Multiple sequence alignment