Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | EL228_RS05685 | Genome accession | NZ_LR134497 |
| Coordinates | 1108008..1108310 (+) | Length | 100 a.a. |
| NCBI ID | WP_052802089.1 | Uniprot ID | A0A5Z1EE36 |
| Organism | Campylobacter jejuni strain NCTC13268 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1103008..1113310
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL228_RS05660 (NCTC13268_01183) | rpsR | 1103370..1103630 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| EL228_RS05665 (NCTC13268_01184) | lon | 1103691..1106066 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| EL228_RS05670 (NCTC13268_01185) | - | 1106083..1106730 (-) | 648 | WP_052802090.1 | outer membrane protein assembly factor BamD | - |
| EL228_RS05675 (NCTC13268_01186) | fliW | 1106891..1107280 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| EL228_RS05680 (NCTC13268_01187) | proC | 1107280..1108011 (+) | 732 | WP_002882606.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| EL228_RS05685 (NCTC13268_01188) | ctsT | 1108008..1108310 (+) | 303 | WP_052802089.1 | transformation system protein | Machinery gene |
| EL228_RS05690 (NCTC13268_01189) | - | 1108307..1108969 (+) | 663 | WP_052802088.1 | hypothetical protein | - |
| EL228_RS05695 (NCTC13268_01190) | - | 1108966..1109418 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| EL228_RS05700 (NCTC13268_01191) | hemD | 1109415..1110044 (-) | 630 | WP_002882604.1 | uroporphyrinogen-III synthase | - |
| EL228_RS05705 (NCTC13268_01192) | thiE | 1110022..1110654 (-) | 633 | WP_002882603.1 | thiamine phosphate synthase | - |
| EL228_RS05710 (NCTC13268_01193) | thiD | 1110644..1111456 (-) | 813 | WP_002882602.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EL228_RS05715 (NCTC13268_01194) | - | 1111453..1112139 (-) | 687 | WP_002882601.1 | endonuclease III domain-containing protein | - |
| EL228_RS05720 (NCTC13268_01195) | - | 1112136..1112897 (-) | 762 | WP_002882600.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12138.16 Da Isoelectric Point: 6.2957
>NTDB_id=1123316 EL228_RS05685 WP_052802089.1 1108008..1108310(+) (ctsT) [Campylobacter jejuni strain NCTC13268]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTTILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTTILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1123316 EL228_RS05685 WP_052802089.1 1108008..1108310(+) (ctsT) [Campylobacter jejuni strain NCTC13268]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCACCATACTTCAAACTTCAGCCTTGAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCACCATACTTCAAACTTCAGCCTTGAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |