Detailed information NTG1123291

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: EL221_RS05870
• Genome accession: NZ_LR134496
• Coordinates: 1121045..1121995 (+)
• Length: 316 a.a.
• NCBI ID: WP_002853794.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain NCTC13266
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1116045..1126995

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL221_RS05845 (NCTC13266_01166)	neuB	1116544..1117584 (+)	1041	WP_002852665.1	N-acetylneuraminate synthase	-
EL221_RS05850 (NCTC13266_01167)	neuC	1117581..1118699 (+)	1119	WP_002852786.1	UDP-N-acetylglucosamine 2-epimerase	-
EL221_RS05855 (NCTC13266_01168)	-	1118696..1119361 (+)	666	WP_002852731.1	acylneuraminate cytidylyltransferase family protein	-
EL221_RS05860 (NCTC13266_01169)	-	1119349..1120182 (+)	834	WP_002854028.1	CatB-related O-acetyltransferase	-
EL221_RS05865 (NCTC13266_01170)	-	1120174..1120986 (-)	813	WP_002854116.1	glycosyltransferase family 2 protein	-
EL221_RS05870 (NCTC13266_01171)	waaF	1121045..1121995 (+)	951	WP_002853794.1	glycosyltransferase family 9 protein	Regulator
EL221_RS05875 (NCTC13266_01173)	-	1121981..1122744 (-)	764	Protein_1123	glycosyltransferase family 25 protein	-
EL221_RS05880 (NCTC13266_01174)	gmhA	1122744..1123304 (-)	561	WP_002787744.1	D-sedoheptulose 7-phosphate isomerase	-
EL221_RS05885 (NCTC13266_01175)	rfaE1	1123301..1124686 (-)	1386	WP_002853608.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
EL221_RS05890 (NCTC13266_01176)	rfaD	1124679..1125632 (-)	954	WP_002853798.1	ADP-glyceromanno-heptose 6-epimerase	-
EL221_RS05895 (NCTC13266_01177)	gmhB	1125633..1126193 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
EL221_RS05900 (NCTC13266_01178)	-	1126275..1126577 (+)	303	WP_002852762.1	cytochrome c	-
EL221_RS05905 (NCTC13266_01179)	ccoS	1126600..1126806 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36225.73 Da
• Isoelectric Point: 10.2421

>NTDB_id=1123291 EL221_RS05870 WP_002853794.1 1121045..1121995(+) (waaF) [Campylobacter jejuni strain NCTC13266]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENATLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVIVKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=1123291 EL221_RS05870 WP_002853794.1 1121045..1121995(+) (waaF) [Campylobacter jejuni strain NCTC13266]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAACATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAGTGATTGTAAAAGCGATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	93.61	99.051	0.927