Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | EL221_RS05535 | Genome accession | NZ_LR134496 |
| Coordinates | 1053498..1053800 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain NCTC13266 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1048498..1058800
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL221_RS05510 (NCTC13266_01098) | rpsR | 1048861..1049121 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| EL221_RS05515 (NCTC13266_01099) | lon | 1049181..1051556 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| EL221_RS05520 (NCTC13266_01100) | - | 1051573..1052220 (-) | 648 | WP_126623889.1 | outer membrane protein assembly factor BamD | - |
| EL221_RS05525 (NCTC13266_01101) | fliW | 1052381..1052770 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| EL221_RS05530 (NCTC13266_01102) | proC | 1052770..1053501 (+) | 732 | WP_002854026.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| EL221_RS05535 (NCTC13266_01103) | ctsT | 1053498..1053800 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| EL221_RS05540 (NCTC13266_01104) | - | 1053797..1054459 (+) | 663 | WP_002853997.1 | hypothetical protein | - |
| EL221_RS05545 (NCTC13266_01105) | - | 1054456..1054908 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| EL221_RS05550 (NCTC13266_01106) | hemD | 1054905..1055534 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| EL221_RS05555 (NCTC13266_01107) | thiE | 1055512..1056144 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| EL221_RS05560 (NCTC13266_01108) | thiD | 1056134..1056946 (-) | 813 | WP_002853647.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EL221_RS05565 (NCTC13266_01109) | - | 1056943..1057629 (-) | 687 | WP_002853783.1 | endonuclease III domain-containing protein | - |
| EL221_RS05570 (NCTC13266_01110) | - | 1057626..1058386 (-) | 761 | Protein_1062 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1123289 EL221_RS05535 WP_002853046.1 1053498..1053800(+) (ctsT) [Campylobacter jejuni strain NCTC13266]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1123289 EL221_RS05535 WP_002853046.1 1053498..1053800(+) (ctsT) [Campylobacter jejuni strain NCTC13266]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |