Detailed information NTG1123050

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: EL330_RS01300
• Genome accession: NZ_LR134482
• Coordinates: 274156..275430 (+)
• Length: 424 a.a.
• NCBI ID: WP_101275351.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain NCTC10475
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 269156..280430

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL330_RS01280 (NCTC10475_00257)	-	270013..270417 (+)	405	WP_023446896.1	hypothetical protein	-
EL330_RS01285 (NCTC10475_00258)	rsmD	270435..271049 (-)	615	WP_041015101.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
EL330_RS01290 (NCTC10475_00259)	-	271049..272581 (-)	1533	WP_101275353.1	M16 family metallopeptidase	-
EL330_RS01295 (NCTC10475_00260)	-	272574..273926 (-)	1353	WP_101275352.1	M16 family metallopeptidase	-
EL330_RS01300 (NCTC10475_00261)	pilA	274156..275430 (+)	1275	WP_101275351.1	signal recognition particle-docking protein FtsY	Machinery gene
EL330_RS01305 (NCTC10475_00262)	ftsE	275427..276098 (+)	672	WP_101275350.1	cell division ATP-binding protein FtsE	-
EL330_RS01310 (NCTC10475_00263)	ftsX	276095..277114 (+)	1020	WP_101275349.1	permease-like cell division protein FtsX	-
EL330_RS01315 (NCTC10475_00264)	rpoH	277226..278080 (+)	855	WP_031298050.1	RNA polymerase sigma factor RpoH	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 45202.49 Da
• Isoelectric Point: 4.5597

>NTDB_id=1123050 EL330_RS01300 WP_101275351.1 274156..275430(+) (pilA) [Stutzerimonas stutzeri strain NCTC10475]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQQPVAEQPAAEPQEDSLAHAEQPEAESEQPAITTSGLLPEPPVEAEILPEPE
PEPEPEPEPEPEPEPEPEMAPVPVAAAAPAEAPAKLGFFARLKQGLSKTSSSIGEGMASLFLGKKAIDDDLLDELETRLL
TADVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELSGLLKPVEQPLVVDSGKRPYVILVVGVNGVGKTTTIGKLAK
KLQLEGKKVMLAAGDTFRAAAVEQLQVWGERNSIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLME
ELKKVRRVMGKLDESAPHEVLLVLDAGTGQNAINQTKQFNQAVELTGLVLTKLDGTAKGGVIFALAKQFGTPIRYIGVGE
GIDDLRTFEADAFVKALFAQRDGA

Nucleotide

• Length: 1275 bp

>NTDB_id=1123050 EL330_RS01300 WP_101275351.1 274156..275430(+) (pilA) [Stutzerimonas stutzeri strain NCTC10475]
ATGTTTGGTTCCAACGACGATAAGAAGACACCGGCCGAGCCCGGCGAAAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
ACCGCAGCAGCCGGTGGCCGAGCAGCCTGCCGCCGAACCGCAGGAAGACAGCCTGGCGCACGCCGAGCAGCCTGAGGCCG
AGAGCGAGCAACCGGCAATCACCACCTCCGGGCTATTGCCCGAACCGCCGGTCGAAGCCGAAATACTCCCAGAGCCAGAG
CCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAAATGGCGCCGGTGCCGGTCGCCGCGGC
AGCGCCCGCCGAAGCACCGGCGAAGCTCGGCTTCTTCGCCCGCCTCAAGCAAGGGCTGTCCAAGACCAGCTCGAGCATCG
GTGAAGGCATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGATGACCTGCTCGACGAACTGGAAACCCGCCTGCTC
ACCGCCGACGTGGGTGTCGAGGCGACGACCGCGATCATGCAGAACCTCACACGCCGCGTGTCGCGCAAGGAGCTAGCCGA
CAGTGGCGCGCTCTATACCGCGCTGCAGGAAGAGCTCTCTGGGTTGCTCAAGCCGGTCGAGCAGCCGCTCGTGGTCGACA
GTGGCAAGCGCCCGTATGTGATCCTCGTGGTCGGGGTGAATGGTGTCGGCAAGACCACCACCATCGGCAAGCTGGCCAAG
AAGCTGCAGCTCGAAGGCAAGAAGGTCATGCTCGCCGCTGGCGACACCTTCCGCGCCGCGGCGGTGGAGCAATTGCAGGT
GTGGGGCGAGCGCAACAGCATTCCGGTGATCGCACAGCACACCGGTGCCGACTCCGCCTCGGTGATCTTCGATGCGGTGC
AGGCGGCCAAGGCGCGGGGCATCGATGTGCTGATCGCCGACACCGCTGGTCGGCTGCACACCAAGGACAACCTGATGGAG
GAGCTGAAGAAGGTCCGCCGGGTGATGGGCAAGCTCGACGAGTCGGCTCCCCACGAGGTCCTGCTCGTGCTCGACGCCGG
CACCGGCCAGAACGCCATCAACCAGACCAAACAGTTCAATCAGGCGGTCGAGCTGACCGGTCTGGTGCTGACCAAACTCG
ACGGCACCGCCAAGGGCGGTGTGATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATCGGCGTCGGCGAA
GGGATCGACGATCTCCGCACGTTCGAGGCCGATGCCTTCGTCAAGGCGCTTTTCGCCCAGCGGGACGGCGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (134-199)

• SRP54-type protein, GTPase domain (SRP54) (219-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.931	99.292	0.486