Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | EL218_RS10230 | Genome accession | NZ_LR134441 |
| Coordinates | 2279924..2281033 (+) | Length | 369 a.a. |
| NCBI ID | WP_034717937.1 | Uniprot ID | - |
| Organism | Kaistella antarctica strain NCTC13489 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 2274924..2286033
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL218_RS10190 (NCTC13489_02096) | - | 2274970..2275440 (+) | 471 | WP_034717928.1 | thermonuclease family protein | - |
| EL218_RS10195 (NCTC13489_02097) | - | 2275470..2276060 (+) | 591 | WP_034717929.1 | hypothetical protein | - |
| EL218_RS10200 (NCTC13489_02098) | - | 2276164..2276604 (+) | 441 | WP_034717930.1 | hypothetical protein | - |
| EL218_RS14630 (NCTC13489_02099) | - | 2276579..2276761 (+) | 183 | WP_034717932.1 | helix-turn-helix domain-containing protein | - |
| EL218_RS10210 (NCTC13489_02100) | - | 2276758..2277048 (+) | 291 | WP_034717935.1 | hypothetical protein | - |
| EL218_RS10215 (NCTC13489_02101) | - | 2277118..2277819 (+) | 702 | Protein_2021 | YifB family Mg chelatase-like AAA ATPase | - |
| EL218_RS10220 (NCTC13489_02102) | - | 2277865..2278935 (-) | 1071 | WP_034721039.1 | DUF3078 domain-containing protein | - |
| EL218_RS10225 (NCTC13489_02103) | - | 2279125..2279895 (+) | 771 | WP_034717936.1 | rhomboid family intramembrane serine protease | - |
| EL218_RS10230 (NCTC13489_02104) | dprA | 2279924..2281033 (+) | 1110 | WP_034717937.1 | DNA-processing protein DprA | Machinery gene |
| EL218_RS10235 (NCTC13489_02106) | gdhA | 2281218..2282576 (+) | 1359 | WP_034717940.1 | NADP-specific glutamate dehydrogenase | - |
| EL218_RS10240 (NCTC13489_02107) | - | 2282724..2283035 (-) | 312 | WP_034717942.1 | hypothetical protein | - |
| EL218_RS10245 (NCTC13489_02108) | - | 2283139..2283630 (-) | 492 | WP_034717944.1 | YkgJ family cysteine cluster protein | - |
| EL218_RS10250 (NCTC13489_02109) | - | 2283846..2284229 (+) | 384 | WP_034717945.1 | group III truncated hemoglobin | - |
| EL218_RS10255 (NCTC13489_02110) | - | 2284264..2284983 (-) | 720 | WP_034717948.1 | DNA alkylation repair protein | - |
Sequence
Protein
Download Length: 369 a.a. Molecular weight: 41136.27 Da Isoelectric Point: 7.2359
>NTDB_id=1122884 EL218_RS10230 WP_034717937.1 2279924..2281033(+) (dprA) [Kaistella antarctica strain NCTC13489]
MRSEENLYAIALRHCPLVGDVIFRKLVNEVGSAKEVWDLSKSGLHNIFGIGKKIAIEIGNAEHLKFAEKEIAFCEKNNIR
INLRHLGDLPELLNECDDAPAILYQKGDFDSSKKAISIVGTRNISSYGKQFIQDFLKEIKGERIMTISGLALGADAEVHE
VSLQNKIATVAVLAHGFHTLYPSRNRKLSHKILDENGVLFTEFNSSQKPDRENFIQRNRVIAGLAPATIVVETAFGGGSI
STATFANNYNREVYALPGRIDEKYSQGCNQLIHQNKAAVISTISSLIEQLGFNKELEKTGSLFPISEIKVLLPEHQQNLL
NTLDKKIPLSLDEISQRLEIPTYKILPDLLQLEILGYIKALSGRQYLSL
MRSEENLYAIALRHCPLVGDVIFRKLVNEVGSAKEVWDLSKSGLHNIFGIGKKIAIEIGNAEHLKFAEKEIAFCEKNNIR
INLRHLGDLPELLNECDDAPAILYQKGDFDSSKKAISIVGTRNISSYGKQFIQDFLKEIKGERIMTISGLALGADAEVHE
VSLQNKIATVAVLAHGFHTLYPSRNRKLSHKILDENGVLFTEFNSSQKPDRENFIQRNRVIAGLAPATIVVETAFGGGSI
STATFANNYNREVYALPGRIDEKYSQGCNQLIHQNKAAVISTISSLIEQLGFNKELEKTGSLFPISEIKVLLPEHQQNLL
NTLDKKIPLSLDEISQRLEIPTYKILPDLLQLEILGYIKALSGRQYLSL
Nucleotide
Download Length: 1110 bp
>NTDB_id=1122884 EL218_RS10230 WP_034717937.1 2279924..2281033(+) (dprA) [Kaistella antarctica strain NCTC13489]
ATGCGTTCCGAAGAAAACCTTTACGCTATCGCACTGCGCCACTGCCCTTTAGTCGGAGATGTAATCTTCCGGAAATTGGT
CAATGAAGTAGGATCGGCCAAAGAAGTTTGGGATCTTTCAAAGTCGGGATTGCATAATATTTTCGGAATTGGAAAAAAGA
TTGCAATAGAAATTGGTAACGCTGAGCATTTAAAATTTGCTGAGAAAGAAATTGCCTTTTGTGAGAAAAACAATATCAGA
ATAAACCTGCGTCATCTTGGTGATTTGCCAGAGCTCTTAAATGAATGCGACGACGCTCCCGCTATCCTCTACCAAAAAGG
GGATTTCGATTCCTCTAAGAAAGCAATCAGTATCGTGGGAACCAGAAATATATCCTCTTACGGGAAACAGTTTATTCAGG
ATTTTTTAAAGGAGATTAAAGGCGAGAGGATAATGACTATTAGCGGCTTAGCATTAGGTGCAGACGCTGAAGTTCATGAA
GTTTCTTTGCAAAATAAGATTGCCACAGTTGCAGTTCTCGCCCATGGTTTTCACACCCTCTATCCATCCAGAAATAGAAA
GCTCTCTCACAAAATACTCGACGAAAATGGAGTGTTATTCACCGAATTCAATTCTTCTCAAAAACCAGATCGCGAGAATT
TTATTCAGAGAAACCGCGTTATTGCAGGTTTGGCTCCAGCAACAATTGTAGTCGAAACCGCTTTTGGAGGAGGATCGATC
AGTACCGCAACTTTTGCAAATAATTATAACAGGGAAGTTTACGCTTTGCCTGGAAGAATTGATGAGAAATATAGCCAAGG
TTGTAATCAACTCATTCACCAAAATAAAGCCGCGGTGATTTCAACCATTTCGTCACTCATCGAACAACTTGGTTTTAACA
AAGAGTTGGAAAAGACAGGTAGTCTTTTCCCTATTTCTGAAATAAAGGTGCTTCTGCCAGAACATCAGCAAAATCTTCTT
AATACTTTAGATAAAAAAATTCCTCTGTCCCTGGACGAAATTTCTCAACGGTTGGAAATCCCAACATATAAAATTTTACC
AGACTTGCTTCAACTCGAAATTCTAGGTTATATAAAAGCCCTTTCTGGCCGACAATATCTTTCTCTCTGA
ATGCGTTCCGAAGAAAACCTTTACGCTATCGCACTGCGCCACTGCCCTTTAGTCGGAGATGTAATCTTCCGGAAATTGGT
CAATGAAGTAGGATCGGCCAAAGAAGTTTGGGATCTTTCAAAGTCGGGATTGCATAATATTTTCGGAATTGGAAAAAAGA
TTGCAATAGAAATTGGTAACGCTGAGCATTTAAAATTTGCTGAGAAAGAAATTGCCTTTTGTGAGAAAAACAATATCAGA
ATAAACCTGCGTCATCTTGGTGATTTGCCAGAGCTCTTAAATGAATGCGACGACGCTCCCGCTATCCTCTACCAAAAAGG
GGATTTCGATTCCTCTAAGAAAGCAATCAGTATCGTGGGAACCAGAAATATATCCTCTTACGGGAAACAGTTTATTCAGG
ATTTTTTAAAGGAGATTAAAGGCGAGAGGATAATGACTATTAGCGGCTTAGCATTAGGTGCAGACGCTGAAGTTCATGAA
GTTTCTTTGCAAAATAAGATTGCCACAGTTGCAGTTCTCGCCCATGGTTTTCACACCCTCTATCCATCCAGAAATAGAAA
GCTCTCTCACAAAATACTCGACGAAAATGGAGTGTTATTCACCGAATTCAATTCTTCTCAAAAACCAGATCGCGAGAATT
TTATTCAGAGAAACCGCGTTATTGCAGGTTTGGCTCCAGCAACAATTGTAGTCGAAACCGCTTTTGGAGGAGGATCGATC
AGTACCGCAACTTTTGCAAATAATTATAACAGGGAAGTTTACGCTTTGCCTGGAAGAATTGATGAGAAATATAGCCAAGG
TTGTAATCAACTCATTCACCAAAATAAAGCCGCGGTGATTTCAACCATTTCGTCACTCATCGAACAACTTGGTTTTAACA
AAGAGTTGGAAAAGACAGGTAGTCTTTTCCCTATTTCTGAAATAAAGGTGCTTCTGCCAGAACATCAGCAAAATCTTCTT
AATACTTTAGATAAAAAAATTCCTCTGTCCCTGGACGAAATTTCTCAACGGTTGGAAATCCCAACATATAAAATTTTACC
AGACTTGCTTCAACTCGAAATTCTAGGTTATATAAAAGCCCTTTCTGGCCGACAATATCTTTCTCTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Riemerella anatipestifer ATCC 11845 = DSM 15868 |
55.464 |
99.187 |
0.55 |