Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | EL220_RS01610 | Genome accession | NZ_LR134388 |
| Coordinates | 370395..371447 (+) | Length | 350 a.a. |
| NCBI ID | WP_027270907.1 | Uniprot ID | A0A0W0YNP3 |
| Organism | Legionella sainthelensi strain NCTC11988 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 365395..376447
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL220_RS01585 (NCTC11988_00329) | - | 365591..366517 (-) | 927 | WP_027270902.1 | type IV secretion system DotC family protein | - |
| EL220_RS01590 (NCTC11988_00330) | dotD | 366498..366989 (-) | 492 | WP_027270903.1 | type IVB secretion system lipoprotein DotD | - |
| EL220_RS01595 (NCTC11988_00331) | rsmD | 367169..367714 (-) | 546 | WP_027270904.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| EL220_RS01600 (NCTC11988_00332) | - | 367711..369015 (-) | 1305 | WP_027270905.1 | M16 family metallopeptidase | - |
| EL220_RS01605 (NCTC11988_00333) | - | 369012..370306 (-) | 1295 | Protein_321 | M16 family metallopeptidase | - |
| EL220_RS01610 (NCTC11988_00334) | pilA | 370395..371447 (+) | 1053 | WP_027270907.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| EL220_RS01615 (NCTC11988_00335) | ftsE | 371434..372084 (+) | 651 | WP_027270908.1 | cell division ATP-binding protein FtsE | - |
| EL220_RS01620 (NCTC11988_00336) | ftsX | 372078..373007 (+) | 930 | WP_027270909.1 | permease-like cell division protein FtsX | - |
| EL220_RS01625 (NCTC11988_00337) | rpoH | 373054..373908 (+) | 855 | WP_027270910.1 | RNA polymerase sigma factor RpoH | - |
| EL220_RS01630 (NCTC11988_00338) | - | 374068..374946 (-) | 879 | WP_027270911.1 | alpha/beta hydrolase | - |
| EL220_RS01635 (NCTC11988_00339) | - | 375199..375915 (+) | 717 | WP_027270912.1 | dienelactone hydrolase family protein | - |
| EL220_RS18460 | - | 376210..376380 (+) | 171 | WP_232002575.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 38321.07 Da Isoelectric Point: 6.0586
>NTDB_id=1122604 EL220_RS01610 WP_027270907.1 370395..371447(+) (pilA) [Legionella sainthelensi strain NCTC11988]
MIKWFKRSHTPTSSEADESQHKEELLPQAPVKEVEEEQEPVKEGFFARFRKSLSKTRHQLGDGIGRLLLGKKEISQDLLD
ELETLLISADLGIETTQMVLKQLAEGLARKQLSDGDAVYDALKSHLQAILNQKKQLLTLETEDHSPFVILMVGVNGAGKT
TTIGKLAKQFQQQGKKVMLAAGDTFRAAAVEQLLVWGERNDIPVIAQHTGADSASVIFDALQAAKARKIDVLIADTAGRL
HTQSNLMEELKKVKRVLQKLCPEAPHETMLILDATIGQNALVQAKQFNDAVGLTGITMTKLDGTAKGGILFAIANELGIP
FRYIGIGEGIEDLQPFDAAQFVGALFNDHI
MIKWFKRSHTPTSSEADESQHKEELLPQAPVKEVEEEQEPVKEGFFARFRKSLSKTRHQLGDGIGRLLLGKKEISQDLLD
ELETLLISADLGIETTQMVLKQLAEGLARKQLSDGDAVYDALKSHLQAILNQKKQLLTLETEDHSPFVILMVGVNGAGKT
TTIGKLAKQFQQQGKKVMLAAGDTFRAAAVEQLLVWGERNDIPVIAQHTGADSASVIFDALQAAKARKIDVLIADTAGRL
HTQSNLMEELKKVKRVLQKLCPEAPHETMLILDATIGQNALVQAKQFNDAVGLTGITMTKLDGTAKGGILFAIANELGIP
FRYIGIGEGIEDLQPFDAAQFVGALFNDHI
Nucleotide
Download Length: 1053 bp
>NTDB_id=1122604 EL220_RS01610 WP_027270907.1 370395..371447(+) (pilA) [Legionella sainthelensi strain NCTC11988]
ATGATTAAATGGTTCAAACGCAGTCACACTCCTACCTCTTCAGAAGCTGATGAGTCCCAGCACAAAGAAGAGCTATTACC
GCAAGCCCCTGTGAAGGAGGTGGAGGAAGAGCAAGAGCCTGTAAAAGAAGGATTTTTTGCTCGGTTTAGGAAAAGTTTAA
GTAAAACGCGTCATCAGTTAGGTGATGGTATTGGCCGGTTATTGTTAGGAAAAAAAGAAATCAGCCAAGATTTGCTGGAT
GAGCTAGAAACTCTTTTAATCAGTGCTGATTTGGGTATAGAAACCACACAAATGGTATTAAAGCAATTGGCAGAAGGATT
AGCACGCAAGCAATTATCTGACGGTGATGCGGTTTATGACGCACTTAAATCTCATTTACAAGCGATTTTAAATCAAAAAA
AACAATTGCTCACTTTAGAAACGGAAGATCATTCTCCTTTTGTTATTTTAATGGTTGGCGTGAATGGAGCTGGCAAAACA
ACTACCATAGGAAAATTAGCAAAACAATTTCAACAGCAGGGTAAAAAAGTGATGTTAGCTGCGGGAGATACCTTTAGAGC
TGCCGCGGTAGAACAATTACTTGTTTGGGGGGAGCGAAATGATATTCCTGTTATTGCCCAACATACAGGGGCTGATAGTG
CGTCAGTCATTTTTGATGCGCTGCAGGCCGCTAAAGCGCGAAAAATAGATGTATTAATTGCAGATACGGCAGGACGATTA
CATACTCAAAGCAATTTAATGGAAGAATTGAAAAAAGTAAAAAGGGTATTACAAAAACTTTGCCCTGAAGCGCCTCATGA
AACAATGTTGATATTAGATGCAACTATAGGGCAAAATGCATTAGTTCAGGCAAAGCAATTTAATGACGCGGTTGGATTAA
CGGGCATTACCATGACCAAGTTGGACGGTACAGCTAAAGGCGGAATTTTGTTTGCTATTGCTAATGAACTAGGGATACCC
TTTCGTTATATAGGGATTGGTGAGGGAATAGAAGATCTTCAACCCTTCGATGCTGCGCAATTTGTTGGTGCATTATTTAA
TGATCACATTTGA
ATGATTAAATGGTTCAAACGCAGTCACACTCCTACCTCTTCAGAAGCTGATGAGTCCCAGCACAAAGAAGAGCTATTACC
GCAAGCCCCTGTGAAGGAGGTGGAGGAAGAGCAAGAGCCTGTAAAAGAAGGATTTTTTGCTCGGTTTAGGAAAAGTTTAA
GTAAAACGCGTCATCAGTTAGGTGATGGTATTGGCCGGTTATTGTTAGGAAAAAAAGAAATCAGCCAAGATTTGCTGGAT
GAGCTAGAAACTCTTTTAATCAGTGCTGATTTGGGTATAGAAACCACACAAATGGTATTAAAGCAATTGGCAGAAGGATT
AGCACGCAAGCAATTATCTGACGGTGATGCGGTTTATGACGCACTTAAATCTCATTTACAAGCGATTTTAAATCAAAAAA
AACAATTGCTCACTTTAGAAACGGAAGATCATTCTCCTTTTGTTATTTTAATGGTTGGCGTGAATGGAGCTGGCAAAACA
ACTACCATAGGAAAATTAGCAAAACAATTTCAACAGCAGGGTAAAAAAGTGATGTTAGCTGCGGGAGATACCTTTAGAGC
TGCCGCGGTAGAACAATTACTTGTTTGGGGGGAGCGAAATGATATTCCTGTTATTGCCCAACATACAGGGGCTGATAGTG
CGTCAGTCATTTTTGATGCGCTGCAGGCCGCTAAAGCGCGAAAAATAGATGTATTAATTGCAGATACGGCAGGACGATTA
CATACTCAAAGCAATTTAATGGAAGAATTGAAAAAAGTAAAAAGGGTATTACAAAAACTTTGCCCTGAAGCGCCTCATGA
AACAATGTTGATATTAGATGCAACTATAGGGCAAAATGCATTAGTTCAGGCAAAGCAATTTAATGACGCGGTTGGATTAA
CGGGCATTACCATGACCAAGTTGGACGGTACAGCTAAAGGCGGAATTTTGTTTGCTATTGCTAATGAACTAGGGATACCC
TTTCGTTATATAGGGATTGGTGAGGGAATAGAAGATCTTCAACCCTTCGATGCTGCGCAATTTGTTGGTGCATTATTTAA
TGATCACATTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
51.685 |
100 |
0.526 |