Detailed information NTG1122563

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: EL203_RS11435
• Genome accession: NZ_LR134383
• Coordinates: 2536895..2537869 (-)
• Length: 324 a.a.
• NCBI ID: WP_375232609.1
• Uniprot ID: -
• Organism: Legionella jordanis strain NCTC11533
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2531895..2542869

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL203_RS11415 (NCTC11533_02345)	-	2533292..2533819 (-)	528	WP_058471251.1	GNAT family N-acetyltransferase	-
EL203_RS14440 (NCTC11533_02346)	-	2533991..2534158 (-)	168	WP_156413826.1	hypothetical protein	-
EL203_RS11420 (NCTC11533_02347)	rpoH	2534404..2535264 (-)	861	WP_058471252.1	RNA polymerase sigma factor RpoH	-
EL203_RS11425 (NCTC11533_02348)	ftsX	2535329..2536258 (-)	930	WP_058471253.1	permease-like cell division protein FtsX	-
EL203_RS11430 (NCTC11533_02349)	ftsE	2536252..2536902 (-)	651	WP_058471254.1	cell division ATP-binding protein FtsE	-
EL203_RS11435 (NCTC11533_02350)	pilA	2536895..2537869 (-)	975	WP_375232609.1	signal recognition particle-docking protein FtsY	Machinery gene
EL203_RS11440 (NCTC11533_02351)	-	2538011..2539333 (+)	1323	WP_058471256.1	pitrilysin family protein	-
EL203_RS11445 (NCTC11533_02352)	-	2539330..2540631 (+)	1302	WP_058471257.1	pitrilysin family protein	-
EL203_RS11450 (NCTC11533_02353)	rsmD	2540628..2541173 (+)	546	WP_058471258.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
EL203_RS11455 (NCTC11533_02354)	dotD	2541262..2541750 (+)	489	WP_058471259.1	type IVB secretion system lipoprotein DotD	-
EL203_RS11460 (NCTC11533_02355)	-	2541731..2542657 (+)	927	WP_058471260.1	type IV secretion system DotC family protein	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 35250.46 Da
• Isoelectric Point: 6.9879

>NTDB_id=1122563 EL203_RS11435 WP_375232609.1 2536895..2537869(-) (pilA) [Legionella jordanis strain NCTC11533]
MGEIEGQNSSASAQDAEKQGFFARFKRGLTKTRQQLGDGIGRLLLGKKEIDSNILEELEILLLGSDLGIETSQTILKQLI
DGLARQKLTDGNAVFDALKERLENMLKPCEKPLNPETDDHSPFVILTVGVNGAGKTTSIGKMAKQFQQQGKKVMLAAGDT
FRAAAVEQLQVWGERNQIPVVAQHTGADSASVIFDALQAARSRKIDVLIADTAGRLHTQGNLMEELKKVKRVLQKLDPKA
PHEVLLVLDASIGQNALNQARQFHEAIGLTGIMMTKLDGTARGGILFAIANELGIPFRYLGIGEGIDDLRPFNASQFVRA
IFND

Nucleotide

• Length: 975 bp

>NTDB_id=1122563 EL203_RS11435 WP_375232609.1 2536895..2537869(-) (pilA) [Legionella jordanis strain NCTC11533]
ATGGGTGAAATTGAAGGGCAAAATTCTTCCGCATCTGCTCAAGATGCAGAAAAACAAGGGTTTTTTGCTCGCTTCAAACG
AGGTTTAACCAAGACCCGCCAACAGCTCGGTGATGGCATTGGACGGCTATTGCTGGGTAAAAAGGAAATTGACAGCAACA
TTCTTGAGGAACTTGAGATTTTACTCTTAGGGTCTGACCTTGGAATTGAGACGTCGCAAACGATCTTAAAACAATTGATA
GATGGTTTGGCCAGGCAGAAGTTAACGGATGGCAATGCCGTCTTCGATGCTTTAAAAGAGCGTCTTGAGAATATGCTTAA
GCCTTGTGAAAAACCATTGAATCCGGAAACGGATGATCATTCTCCTTTTGTGATCCTCACGGTGGGTGTTAATGGTGCTG
GTAAAACCACATCCATTGGTAAAATGGCCAAGCAATTTCAGCAGCAAGGTAAAAAAGTGATGTTGGCTGCAGGCGATACT
TTTCGTGCAGCCGCAGTCGAACAACTCCAGGTTTGGGGTGAACGCAACCAAATTCCTGTCGTGGCCCAGCATACTGGCGC
CGATAGCGCTTCTGTGATTTTCGATGCTTTGCAGGCCGCCAGGTCCAGAAAAATTGATGTGTTAATAGCGGATACCGCAG
GGCGGCTTCACACCCAGGGTAACTTGATGGAAGAGTTAAAAAAAGTGAAGCGGGTGCTGCAAAAATTGGATCCCAAAGCG
CCTCATGAAGTGCTTTTGGTTTTGGATGCCAGCATCGGACAGAATGCCTTGAATCAGGCCCGCCAATTCCATGAAGCGAT
TGGTTTAACGGGAATTATGATGACGAAACTGGATGGTACTGCAAGAGGAGGGATACTGTTTGCAATTGCTAATGAACTAG
GCATACCATTCCGTTATCTAGGGATTGGAGAAGGGATAGATGATCTTCGTCCTTTCAATGCTTCACAATTTGTGAGAGCC
ATATTTAATGATTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (122-322)

• SRP54-type protein, helical bundle domain (SRP54_N) (36-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	55.385	100	0.556