Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | EL203_RS00795 | Genome accession | NZ_LR134383 |
| Coordinates | 186648..187280 (+) | Length | 210 a.a. |
| NCBI ID | WP_058471444.1 | Uniprot ID | A0A0W0VC55 |
| Organism | Legionella jordanis strain NCTC11533 | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 181648..192280
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL203_RS00780 (NCTC11533_00162) | - | 184422..185213 (+) | 792 | WP_058471447.1 | sulfite exporter TauE/SafE family protein | - |
| EL203_RS00785 (NCTC11533_00163) | dapB | 185291..186022 (-) | 732 | WP_058471446.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| EL203_RS00790 (NCTC11533_00164) | - | 186059..186244 (-) | 186 | WP_058471445.1 | hypothetical protein | - |
| EL203_RS00795 (NCTC11533_00165) | rocC | 186648..187280 (+) | 633 | WP_058471444.1 | ProQ/FinO family protein | Regulator |
| EL203_RS00800 (NCTC11533_00166) | pyk | 187351..188763 (-) | 1413 | WP_058471443.1 | pyruvate kinase | - |
| EL203_RS00805 (NCTC11533_00167) | - | 188750..189934 (-) | 1185 | WP_058471442.1 | phosphoglycerate kinase | - |
| EL203_RS00810 (NCTC11533_00168) | gap | 189945..190937 (-) | 993 | WP_058471441.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
Sequence
Protein
Download Length: 210 a.a. Molecular weight: 23586.33 Da Isoelectric Point: 10.9567
>NTDB_id=1122545 EL203_RS00795 WP_058471444.1 186648..187280(+) (rocC) [Legionella jordanis strain NCTC11533]
MRRQELHPRTAVINKTQKNKSKKARNEALLWLAATFPHVFDNSLRIRPLKIGIMEDILVYADKAAEHGISKSKLREAVVV
FTRRIDYLACLKAREMRVDLEGNPVSMVSEEEAERAATKIRKRIEKSARNARKLAPAKGQPLNTSSASQITESIAYFPER
APAFSVQHAAAPARPAVVIKHKPSRQFDPDAVARLKEKLGLSRKSIETTD
MRRQELHPRTAVINKTQKNKSKKARNEALLWLAATFPHVFDNSLRIRPLKIGIMEDILVYADKAAEHGISKSKLREAVVV
FTRRIDYLACLKAREMRVDLEGNPVSMVSEEEAERAATKIRKRIEKSARNARKLAPAKGQPLNTSSASQITESIAYFPER
APAFSVQHAAAPARPAVVIKHKPSRQFDPDAVARLKEKLGLSRKSIETTD
Nucleotide
Download Length: 633 bp
>NTDB_id=1122545 EL203_RS00795 WP_058471444.1 186648..187280(+) (rocC) [Legionella jordanis strain NCTC11533]
ATGAGAAGGCAAGAACTTCATCCTCGCACAGCGGTAATTAATAAAACGCAAAAAAATAAATCCAAAAAAGCCCGGAATGA
GGCCTTATTGTGGCTTGCAGCTACTTTCCCTCACGTTTTTGATAACTCACTTAGAATTCGTCCATTAAAAATAGGGATTA
TGGAAGACATATTGGTCTATGCCGATAAAGCGGCGGAGCATGGTATTTCAAAAAGTAAATTACGCGAGGCGGTGGTTGTA
TTTACCCGTCGTATTGATTACCTGGCCTGCTTGAAAGCTCGGGAAATGCGTGTGGATTTGGAGGGAAATCCCGTTAGCAT
GGTCAGTGAGGAAGAAGCCGAACGTGCTGCTACAAAAATTCGAAAGCGCATTGAGAAAAGTGCTCGAAACGCTCGCAAGC
TTGCACCTGCAAAAGGACAGCCTTTAAATACGTCTTCAGCATCCCAAATCACGGAATCGATAGCCTATTTTCCTGAGCGG
GCACCAGCCTTCAGCGTGCAACATGCCGCAGCACCAGCTCGCCCTGCCGTGGTAATCAAACACAAACCTTCCCGACAGTT
CGATCCGGATGCCGTTGCCAGATTGAAAGAAAAATTAGGTTTGTCGCGCAAATCCATCGAAACAACGGATTAA
ATGAGAAGGCAAGAACTTCATCCTCGCACAGCGGTAATTAATAAAACGCAAAAAAATAAATCCAAAAAAGCCCGGAATGA
GGCCTTATTGTGGCTTGCAGCTACTTTCCCTCACGTTTTTGATAACTCACTTAGAATTCGTCCATTAAAAATAGGGATTA
TGGAAGACATATTGGTCTATGCCGATAAAGCGGCGGAGCATGGTATTTCAAAAAGTAAATTACGCGAGGCGGTGGTTGTA
TTTACCCGTCGTATTGATTACCTGGCCTGCTTGAAAGCTCGGGAAATGCGTGTGGATTTGGAGGGAAATCCCGTTAGCAT
GGTCAGTGAGGAAGAAGCCGAACGTGCTGCTACAAAAATTCGAAAGCGCATTGAGAAAAGTGCTCGAAACGCTCGCAAGC
TTGCACCTGCAAAAGGACAGCCTTTAAATACGTCTTCAGCATCCCAAATCACGGAATCGATAGCCTATTTTCCTGAGCGG
GCACCAGCCTTCAGCGTGCAACATGCCGCAGCACCAGCTCGCCCTGCCGTGGTAATCAAACACAAACCTTCCCGACAGTT
CGATCCGGATGCCGTTGCCAGATTGAAAGAAAAATTAGGTTTGTCGCGCAAATCCATCGAAACAACGGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
59.565 |
100 |
0.652 |